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F1N616 (F1N616_BOVIN) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length988 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSBTAP00000038136

Sequences

Sequence LengthMass (Da)Tools
F1N616 [UniParc].

Last modified November 16, 2011. Version 2.
Checksum: D0718D2FE4795A26

FASTA988106,852
        10         20         30         40         50         60 
MLGNHLDPDG TQVSPAAPCS SPPIIGWPRP RADTPGPQPQ PMDLRVGQRP PVEPPPEPTL 

        70         80         90        100        110        120 
LALQHPQRLH HHLFLAGLQP QRSAEPMRLS MDTPMPELQM GQQEQELRQL LNKDKSKRSA 

       130        140        150        160        170        180 
VASSVVKQKL AEVILKKQQA ALERTVHPNS PSVPYRTLEP LETEGAARSM LSSFLPPVPS 

       190        200        210        220        230        240 
LPCDPPEHFP LRKTVSEPNL KLRYKPKKSL ERRKNPLLRK ESAPPSLRRR PAETLGDSSP 

       250        260        270        280        290        300 
SSSSTPASGC SSPNDSEHGP NPVLGSEALL GQRLRLQETS LAPFALLPTI TLGLPAPARA 

       310        320        330        340        350        360 
DGDRRTHATL GPRGPVLGNP HAHLFLPHGL EPEAGGPLPS RLQPILLLDP SVTHTPLLTV 

       370        380        390        400        410        420 
PGLGPLPFHF AQSLLTTERP SGSGLHRPLS RTRSEPLPPS ATTPSLLGPL QPRLERLKPH 

       430        440        450        460        470        480 
VQLIKRSAKP SEKPRLRQIP SAEDLETDGG SVGPLRDDGL EHRESSHGQQ EARGTVPLQQ 

       490        500        510        520        530        540 
HQQVFLWEQQ RLAGRLPRGA TGDSVLLPLA PGSHRPLSRA QSSPAAPASL STPEPASQAR 

       550        560        570        580        590        600 
ILPSSETPAR TLPFTTGLVY DSVMLKHQCS CGDNSRHPEH AGRIQSIWSR LLERGLRSQC 

       610        620        630        640        650        660 
ESLRGRKASL EELQSVHSER HVLLYGTNPL SRLKLDNGKL AGLLAQRMFV MLPCGGVGVD 

       670        680        690        700        710        720 
TDTIWNELHS SNAARWAAGS VTDLAFKVAS RELKNGFAVV RPPGHHADHS TAMGFCFFNS 

       730        740        750        760        770        780 
VAIACRQLQQ QGKASKILIV DWDVHHGNGT QQTFYQDPNV LYISLHRHDD GNFFPGSGAV 

       790        800        810        820        830        840 
DEVGAGSGEG FNVNVAWAGG LDPPMGDPEY LAAFRIVVMP IAREFSPDLV LVSAGFDAAE 

       850        860        870        880        890        900 
GHPPPLGGYH VSAKCFGYMT QQLMSLAGGA VVLALEGGHD LTAICDASEA CVAALLGNKV 

       910        920        930        940        950        960 
DPLSEEGWKQ KPNLNAIRSL EAVIRVHSEY WGCMQRLASR PDSWVHRVPG ADAEEVEAVT 

       970        980 
ALASLSVGIL AEERTSGQLV EEEEPMNL 

« Hide

References

« Hide 'large scale' references
[1]"A whole-genome assembly of the domestic cow, Bos taurus."
Zimin A.V., Delcher A.L., Florea L., Kelley D.R., Schatz M.C., Puiu D., Hanrahan F., Pertea G., Van Tassell C.P., Sonstegard T.S., Marcais G., Roberts M., Subramanian P., Yorke J.A., Salzberg S.L.
Genome Biol. 10:R42.01-R42.10(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Hereford Ensembl ENSBTAP00000038136.
[2]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Hereford Ensembl ENSBTAP00000038136.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
DAAA02012987 Genomic DNA. No translation available.
RefSeqNP_001180070.1. NM_001193141.1.
UniGeneBt.2919.

3D structure databases

ProteinModelPortalF1N616.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSBTAT00000038321; ENSBTAP00000038136; ENSBTAG00000026819.
GeneID509843.
KEGGbta:509843.

Organism-specific databases

CTD51564.

Phylogenomic databases

GeneTreeENSGT00530000062809.
KOK11408.
OMAAFRIVVM.
OrthoDBEOG7RFTH5.
TreeFamTF106174.

Family and domain databases

Gene3D3.40.800.20. 1 hit.
InterProIPR000286. His_deacetylse.
IPR023801. His_deacetylse_dom.
IPR017320. Histone_deAcase_II_euk.
[Graphical view]
PANTHERPTHR10625. PTHR10625. 1 hit.
PfamPF00850. Hist_deacetyl. 1 hit.
[Graphical view]
PIRSFPIRSF037911. HDAC_II_euk. 1 hit.
PRINTSPR01270. HDASUPER.
ProtoNetSearch...

Other

NextBio20869160.

Entry information

Entry nameF1N616_BOVIN
AccessionPrimary (citable) accession number: F1N616
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: November 16, 2011
Last modified: April 16, 2014
This is version 20 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)