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F1N3X6 (F1N3X6_BOVIN) Unreviewed, UniProtKB/TrEMBL

Last modified March 6, 2013. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length501 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the AB hydrolase superfamily. Lipase family. RuleBase RU004262

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSBTAP00000007206

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1681Nucleophile By similarity PIRSR PIRSR000865-1
Active site1941Charge relay system By similarity PIRSR PIRSR000865-1
Active site2801Charge relay system By similarity PIRSR PIRSR000865-1

Sequences

Sequence LengthMass (Da)Tools
F1N3X6 [UniParc].

Last modified November 16, 2011. Version 2.
Checksum: C2EBF7DF8CD4D6BC

FASTA50156,846
        10         20         30         40         50         60 
MENPLCVSIF LFYCILIQSS AHGQSLGPES FGRRSRAAET NKTPQETRTK FLLFRGETDK 

        70         80         90        100        110        120 
GCQILLNHSD TLQQCGFNSS LPLVMIVHGW LVDDILEDWV WEMVAALKSQ LAQSVNVGLA 

       130        140        150        160        170        180 
EWVTLAHNHY TTAVRNTRLV GQEIAALLQW LQESVQFSPS HVHLIGYSLG AHVSGFAGSY 

       190        200        210        220        230        240 
MSRKHKIGRI TVIDCCSPRS SRAQFSDGLI PQQAGFLSTL MSFHWNVPGL SVKGLTGLLW 

       250        260        270        280        290        300 
PPKFHPNDGT KLPGVHFHTL LRKEAFQGLP SITRTVKCAH ERSVHLFIDS LLHADMQSMA 

       310        320        330        340        350        360 
YLCRDMDRFS QGLCLSCKKG RCNTLGYHTR QERQSKKSKS LFLVTRAQSP FKVYHYQFKI 

       370        380        390        400        410        420 
RFINQTENPV EPTFTVSFLG TRGERQKIPI TLSKGITSNE TYSFLITLDV DIGELIMIKF 

       430        440        450        460        470        480 
KWENRMVWSN VWNTVQTIIP WGRGSLHSGL ALKSIRVKVG ETQQRMTFCS ENMNDLLLHP 

       490        500 
AREKTFVRCE ANSETLKRKI R 

« Hide

References

« Hide 'large scale' references
[1]"A whole-genome assembly of the domestic cow, Bos taurus."
Zimin A.V., Delcher A.L., Florea L., Kelley D.R., Schatz M.C., Puiu D., Hanrahan F., Pertea G., Van Tassell C.P., Sonstegard T.S., Marcais G., Roberts M., Subramanian P., Yorke J.A., Salzberg S.L.
Genome Biol. 10:R42-R42(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Hereford Ensembl ENSBTAP00000007206.
[2]Ensembl
Submitted (MAY-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Hereford Ensembl ENSBTAP00000007206.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
DAAA02028828 Genomic DNA. No translation available.
DAAA02028829 Genomic DNA. No translation available.
DAAA02028830 Genomic DNA. No translation available.
DAAA02028831 Genomic DNA. No translation available.
DAAA02028832 Genomic DNA. No translation available.
IPIIPI00714758.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSBTAT00000007206; ENSBTAP00000007206; ENSBTAG00000005479.

Phylogenomic databases

GeneTreeENSGT00560000077136.
OMACHFLELY.

Family and domain databases

Gene3D2.60.60.20. 1 hit.
InterProIPR000734. Lipase.
IPR002333. Lipase_hep.
IPR008976. Lipase_LipOase.
IPR013818. Lipase_N.
IPR001024. LipOase_LH2.
IPR016272. Lipoprotein_lipase_LIPH.
[Graphical view]
PANTHERPTHR11610. PTHR11610. 1 hit.
PTHR11610:SF2. PTHR11610:SF2. 1 hit.
PfamPF00151. Lipase. 1 hit.
PF01477. PLAT. 1 hit.
[Graphical view]
PIRSFPIRSF000865. Lipoprotein_lipase_LIPH. 1 hit.
PRINTSPR00824. HEPLIPASE.
PR00821. TAGLIPASE.
SMARTSM00308. LH2. 1 hit.
[Graphical view]
SUPFAMSSF49723. Lipase_LipOase. 1 hit.
PROSITEPS50095. PLAT. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF1N3X6_BOVIN
AccessionPrimary (citable) accession number: F1N3X6
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: November 16, 2011
Last modified: March 6, 2013
This is version 16 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)