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F1MW26 (F1MW26_BOVIN) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length471 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains hemopexin repeats. SAAS SAAS018486

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSBTAP00000020045

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site2231 By similarity PIRSR PIRSR001191-1

Sequences

Sequence LengthMass (Da)Tools
F1MW26 [UniParc].

Last modified November 16, 2011. Version 2.
Checksum: 8177F112FE7FCEAF

FASTA47154,069
        10         20         30         40         50         60 
MRPRVLAGFL FFSWTACWSL PLPSDGDSED LSEEDFQFAE SYLKSYYYPQ NPAGILKKTA 

        70         80         90        100        110        120 
ASSVIDRLRE MQSFFGLEVT GRLDDNTLDI MKKPRCGVPD VGEYNVFPRT LKWSKMNLTY 

       130        140        150        160        170        180 
RIVNYTPDLT HSEVEKAFRK AFKVWSDVTP LNFTRIHNGT ADIMISFGTK EHGDFYPFDG 

       190        200        210        220        230        240 
PSGLLAHAFP PGPNYGGDAH FDDDETWTSS SKGYNLFLVA AHEFGHSLGL DHSKDPGALM 

       250        260        270        280        290        300 
FPIYTYTGKS HFMLPDDDVQ GIQSLYGPGD EDPYSKHPKT PDKCDPSLSL DAITSLRGET 

       310        320        330        340        350        360 
LIFKDRFFWR LHPQQVEAEL FLTKSFWPEL PNRIDAAYEH PSHDLIFIFR GRKFWALSGY 

       370        380        390        400        410        420 
DILEDYPKKI SELGFPKHVK KISAALHFED SGKTLFFSEN QVWSYDDTNH VMDKDYPRLI 

       430        440        450        460        470 
EEVFPGIGDK VDAVYQKNGY IYFFNGPIQF EYSIWSNRIV RVMTTNSLLW C 

« Hide

References

« Hide 'large scale' references
[1]"A whole-genome assembly of the domestic cow, Bos taurus."
Zimin A.V., Delcher A.L., Florea L., Kelley D.R., Schatz M.C., Puiu D., Hanrahan F., Pertea G., Van Tassell C.P., Sonstegard T.S., Marcais G., Roberts M., Subramanian P., Yorke J.A., Salzberg S.L.
Genome Biol. 10:R42.01-R42.10(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Hereford Ensembl ENSBTAP00000020045.
[2]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Hereford Ensembl ENSBTAP00000020045.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
DAAA02039864 Genomic DNA. No translation available.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSBTAT00000020045; ENSBTAP00000020045; ENSBTAG00000015059.

Phylogenomic databases

GeneTreeENSGT00750000117336.
OMANQVWSYD.
OrthoDBEOG7XPZ57.
TreeFamTF315428.

Family and domain databases

Gene3D2.110.10.10. 1 hit.
3.40.390.10. 1 hit.
InterProIPR028711. Collagenase_3.
IPR000585. Hemopexin-like_dom.
IPR018487. Hemopexin-like_repeat.
IPR018486. Hemopexin_CS.
IPR024079. MetalloPept_cat_dom.
IPR001818. Pept_M10_metallopeptidase.
IPR021190. Pept_M10A.
IPR016293. Pept_M10A_stromelysin-type.
IPR021158. Pept_M10A_Zn_BS.
IPR006026. Peptidase_Metallo.
IPR002477. Peptidoglycan-bd-like.
[Graphical view]
PANTHERPTHR10201:SF130. PTHR10201:SF130. 1 hit.
PfamPF00045. Hemopexin. 4 hits.
PF00413. Peptidase_M10. 1 hit.
PF01471. PG_binding_1. 1 hit.
[Graphical view]
PIRSFPIRSF001191. Peptidase_M10A_matrix. 1 hit.
PRINTSPR00138. MATRIXIN.
SMARTSM00120. HX. 4 hits.
SM00235. ZnMc. 1 hit.
[Graphical view]
SUPFAMSSF47090. SSF47090. 1 hit.
SSF50923. SSF50923. 1 hit.
PROSITEPS00546. CYSTEINE_SWITCH. 1 hit.
PS00024. HEMOPEXIN. 1 hit.
PS51642. HEMOPEXIN_2. 4 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF1MW26_BOVIN
AccessionPrimary (citable) accession number: F1MW26
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: November 16, 2011
Last modified: July 9, 2014
This is version 30 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)