F1MVV4 (F1MVV4_BOVIN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Uncharacterized protein Ensembl ENSBTAP00000013074

Gene names

Name:

PTCH1 Ensembl ENSBTAP00000013074

Organism

Bos taurus (Bovine) [Reference proteome] Ensembl ENSBTAP00000013074

Taxonomic identifier

9913 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Laurasiatheria › Cetartiodactyla › Ruminantia › Pecora › Bovidae › Bovinae › Bos

Protein attributes

Sequence length	584 AA.
Sequence status	Fragment.
Protein existence	Predicted

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSBTAP00000013074

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular_component	membrane Inferred from electronic annotation. Source: InterPro
Molecular_function	hedgehog receptor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	Ensembl ENSBTAP00000013074

Sequences

	Sequence		Length	Mass (Da)
	F1MVV4 [UniParc]. Last modified November 16, 2011. Version 2. Checksum: 50A3F114BFB07703	FASTA	584	66,088
	10 20 30 40 50 60 CLKSNGLSNN KAAVVVVFNF AMVLLIFPAI LSMDLYRRED RRLDIFCCFT SPCVSRVIQV 70 80 90 100 110 120 EPQAYTETHD NTRYSPPPPY SSHGFAHETQ ITMQSTVQLR TEYDPHTHVY YTTAEPRSEI 130 140 150 160 170 180 SVQPVTMAQD TLSCQSPEST SSTRDLLSQF SDSSLHCLEP PCTRWTLSSF AEKHYAPFLL 190 200 210 220 230 240 KPKAKVVVIF LFLGLLGVSL YGTTRVRDGL DLTDIVPRET REYDFIAAQF KYFSFYNMYI 250 260 270 280 290 300 VTQKADYPNI QHLLYDLHKS FSNVKYVMLE ENKQLPKMWL HYFRDWLQGL QDAFDSDWET 310 320 330 340 350 360 GKIMPNNYKN GSDDGVLAYK LLVQTGSRDK PIDISQLTKR RLVDADGIIN PSAFYIYLTA 370 380 390 400 410 420 WVSNDPVAYA ASQANIRPHR PEWVHDKADY MPETRLRIPA AEPIEYAQFP FYLNGLRDTS 430 440 450 460 470 480 DFVEAIEKVR TICNNYTSLG LSSYPNGYPF LFWEQYIGLR HWLLLSISVV LACTFLVCAV 490 500 510 520 530 540 FLLNPWTAGI IVTVLALMTV ELFGMMGLIG IKLSAVPVVI LIASVGIGVE FTVHVALAFL 550 560 570 580 TAIGDKNRRA VLALEHMFAP VLDGAVSTLL GVLMLAGSEF DFIV

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"A whole-genome assembly of the domestic cow, Bos taurus." Zimin A.V., Delcher A.L., Florea L., Kelley D.R., Schatz M.C., Puiu D., Hanrahan F., Pertea G., Van Tassell C.P., Sonstegard T.S., Marcais G., Roberts M., Subramanian P., Yorke J.A., Salzberg S.L. Genome Biol. 10:R42-R42(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Hereford Ensembl ENSBTAP00000013074.
[2]	Ensembl Submitted (JUL-2011) to UniProtKB Cited for: IDENTIFICATION. Strain: Hereford Ensembl ENSBTAP00000013074.

Cross-references

Sequence databases
EMBL GenBank DDBJ	DAAA02024005 Genomic DNA. No translation available.
IPI	IPI00694886.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSBTAT00000013074; ENSBTAP00000013074; ENSBTAG00000009903.
Phylogenomic databases
GeneTree	ENSGT00680000099777.
OMA	LATEFQE.
Family and domain databases
InterPro	IPR003392. Patched. [Graphical view]
Pfam	PF02460. Patched. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F1MVV4_BOVIN

Accession

Primary (citable) accession number: F1MVV4

Entry history

Integrated into UniProtKB/TrEMBL:	May 3, 2011
Last sequence update:	November 16, 2011
Last modified:	October 31, 2012
This is version 13 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)