SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

F1MSR8

- F1MSR8_BOVIN

UniProt

F1MSR8 - F1MSR8_BOVIN

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name: Collagen alpha-1(II) chain
Gene
COL2A1
Organism
Bos taurus (Bovine)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. extracellular matrix structural constituent Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Collagen alpha-1(II) chainImported
Gene namesi
Name:COL2A1Imported
OrganismiBos taurus (Bovine)Imported
Taxonomic identifieri9913 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
ProteomesiUP000009136: Chromosome 5

Subcellular locationi

GO - Cellular componenti

  1. collagen trimer Source: InterPro
Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiF1MSR8.

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00740000114967.
KOiK06236.
OrthoDBiEOG7TJ3HH.

Family and domain databases

InterProiIPR008160. Collagen.
IPR000885. Fib_collagen_C.
[Graphical view]
PfamiPF01410. COLFI. 1 hit.
PF01391. Collagen. 8 hits.
[Graphical view]
ProDomiPD002078. Fib_collagen_C. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTiSM00038. COLFI. 1 hit.
[Graphical view]
PROSITEiPS51461. NC1_FIB. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F1MSR8-1 [UniParc]FASTAAdd to Basket

« Hide

MIRLGAPQTL VLLTLLVAAV LRCHGQDVRQ PGPKGQKGEP GDIKDIVGPK     50
GPPGPQGPAG EQGPRGDRGD KGEKGAPGPR GRDGEPGTPG NPGPPGPPGP 100
PGPPGLGGNF AAQMAGGFDE KAGGAQMGVM QGPMGPMGPR GPPGPAGAPG 150
PQGFQGNPGE PGEPGVSGPM GPRGPPGPPG KPGDDGEAGK PGKSGERGPP 200
GPQGARGFPG TPGLPGVKGH RGYPGLDGAK GEAGAPGVKG ESGSPGENGS 250
PGPMGPRGLP GERGRTGPAG AAGARGNDGQ PGPAGPPGPV GPAGGPGFPG 300
APGAKGEAGP TGARGPEGAQ GPRGEPGTPG SPGPAGAAGN PGTDGIPGAK 350
GSAGAPGIAG APGFPGPRGP PGPQGATGPL GPKGQTGEPG IAGFKGEQGP 400
KGEPGPAGPQ GAPGPAGEEG KRGARGEPGG AGPAGPPGER GAPGNRGFPG 450
QDGLAGPKGA PGERGPSGLA GPKGANGDPG RPGEPGLPGA RGLTGRPGDA 500
GPQGKVGPSG APGEDGRPGP PGPQGARGQP GVMGFPGPKG ANGEPGKAGE 550
KGLPGAPGLR GLPGKDGETG AAGPPGPAGP AGERGEQGAP GPSGFQGLPG 600
PPGPPGEGGK PGDQGVPGEA GAPGLVGPRG ERGFPGERGS PGSQGLQGAR 650
GLPGTPGTDG PKGAAGPAGP PGAQGPPGLQ GMPGERGAAG IAGPKGDRGD 700
VGEKGPEGAP GKDGGRGLTG PIGPPGPAGA NGEKGEVGPP GPAGTAGARG 750
APGERGETGP PGPAGFAGPP GADGQPGAKG EQGEAGQKGD AGAPGPQGPS 800
GAPGPQGPTG VTGPKGARGA QGPPGATGFP GAAGRVGPPG SNGNPGPPGP 850
PGPSGKDGPK GARGDSGPPG RAGDPGLQGP AGPPGEKGEP GDDGPSGPDG 900
PPGPQGLAGQ RGIVGLPGQR GERGFPGLPG PSGEPGKQGA PGASGDRGPP 950
GPVGPPGLTG PAGEPGREGS PGADGPPGRD GAAGVKGDRG ETGAVGAPGA 1000
PGPPGSPGPA GPIGKQGDRG EAGAQGPMGP AGPAGARGMP GPQGPRGDKG 1050
ETGEAGERGL KGHRGFTGLQ GLPGPPGPSG DQGASGPAGP SGPRGPPGPV 1100
GPSGKDGANG IPGPIGPPGP RGRSGETGPA GPPGNPGPPG PPGPPGPGID 1150
MSAFAGLGQR EKGPDPLQYM RADEAAGNLR QHDAEVDATL KSLNNQIESL 1200
RSPEGSRKNP ARTCRDLKLC HPEWKSGDYW IDPNQGCTLD AMKVFCNMET 1250
GETCVYPNPA SVPKKNWWSS KSKDKKHIWF GETINGGFHF SYGDDNLAPN 1300
TANVQMTFLR LLSTEGSQNI TYHCKNSIAY LDEAAGNLKK ALLIQGSNDV 1350
EIRAEGNSRF TYTVLKDGCT KHTGKWGKTM IEYRSQKTSR LPIIDIAPMD 1400
IGGPEQEFGV DIGPVCFL 1418
Length:1,418
Mass (Da):134,427
Last modified:November 16, 2011 - v2
Checksum:i95045FA20C8B2A39
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DAAA02012985 Genomic DNA. No translation available.
DAAA02012986 Genomic DNA. No translation available.
RefSeqiNP_001106695.1. NM_001113224.1.
UniGeneiBt.21390.

Genome annotation databases

EnsembliENSBTAT00000017509; ENSBTAP00000017509; ENSBTAG00000013155.
GeneIDi407142.
KEGGibta:407142.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DAAA02012985 Genomic DNA. No translation available.
DAAA02012986 Genomic DNA. No translation available.
RefSeqi NP_001106695.1. NM_001113224.1.
UniGenei Bt.21390.

3D structure databases

ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi F1MSR8.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSBTAT00000017509 ; ENSBTAP00000017509 ; ENSBTAG00000013155 .
GeneIDi 407142.
KEGGi bta:407142.

Organism-specific databases

CTDi 1280.

Phylogenomic databases

GeneTreei ENSGT00740000114967.
KOi K06236.
OrthoDBi EOG7TJ3HH.

Miscellaneous databases

NextBioi 20818406.

Family and domain databases

InterProi IPR008160. Collagen.
IPR000885. Fib_collagen_C.
[Graphical view ]
Pfami PF01410. COLFI. 1 hit.
PF01391. Collagen. 8 hits.
[Graphical view ]
ProDomi PD002078. Fib_collagen_C. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
SMARTi SM00038. COLFI. 1 hit.
[Graphical view ]
PROSITEi PS51461. NC1_FIB. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HerefordImported.
  2. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: HerefordImported.

Entry informationi

Entry nameiF1MSR8_BOVIN
AccessioniPrimary (citable) accession number: F1MSR8
Entry historyi
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: November 16, 2011
Last modified: July 9, 2014
This is version 18 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

Similar proteinsi