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F1MSR8 (F1MSR8_BOVIN) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length1418 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSBTAP00000017509

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentcollagen trimer

Inferred from electronic annotation. Source: InterPro

   Molecular_functionextracellular matrix structural constituent

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F1MSR8 [UniParc].

Last modified November 16, 2011. Version 2.
Checksum: 95045FA20C8B2A39

FASTA1,418134,427
        10         20         30         40         50         60 
MIRLGAPQTL VLLTLLVAAV LRCHGQDVRQ PGPKGQKGEP GDIKDIVGPK GPPGPQGPAG 

        70         80         90        100        110        120 
EQGPRGDRGD KGEKGAPGPR GRDGEPGTPG NPGPPGPPGP PGPPGLGGNF AAQMAGGFDE 

       130        140        150        160        170        180 
KAGGAQMGVM QGPMGPMGPR GPPGPAGAPG PQGFQGNPGE PGEPGVSGPM GPRGPPGPPG 

       190        200        210        220        230        240 
KPGDDGEAGK PGKSGERGPP GPQGARGFPG TPGLPGVKGH RGYPGLDGAK GEAGAPGVKG 

       250        260        270        280        290        300 
ESGSPGENGS PGPMGPRGLP GERGRTGPAG AAGARGNDGQ PGPAGPPGPV GPAGGPGFPG 

       310        320        330        340        350        360 
APGAKGEAGP TGARGPEGAQ GPRGEPGTPG SPGPAGAAGN PGTDGIPGAK GSAGAPGIAG 

       370        380        390        400        410        420 
APGFPGPRGP PGPQGATGPL GPKGQTGEPG IAGFKGEQGP KGEPGPAGPQ GAPGPAGEEG 

       430        440        450        460        470        480 
KRGARGEPGG AGPAGPPGER GAPGNRGFPG QDGLAGPKGA PGERGPSGLA GPKGANGDPG 

       490        500        510        520        530        540 
RPGEPGLPGA RGLTGRPGDA GPQGKVGPSG APGEDGRPGP PGPQGARGQP GVMGFPGPKG 

       550        560        570        580        590        600 
ANGEPGKAGE KGLPGAPGLR GLPGKDGETG AAGPPGPAGP AGERGEQGAP GPSGFQGLPG 

       610        620        630        640        650        660 
PPGPPGEGGK PGDQGVPGEA GAPGLVGPRG ERGFPGERGS PGSQGLQGAR GLPGTPGTDG 

       670        680        690        700        710        720 
PKGAAGPAGP PGAQGPPGLQ GMPGERGAAG IAGPKGDRGD VGEKGPEGAP GKDGGRGLTG 

       730        740        750        760        770        780 
PIGPPGPAGA NGEKGEVGPP GPAGTAGARG APGERGETGP PGPAGFAGPP GADGQPGAKG 

       790        800        810        820        830        840 
EQGEAGQKGD AGAPGPQGPS GAPGPQGPTG VTGPKGARGA QGPPGATGFP GAAGRVGPPG 

       850        860        870        880        890        900 
SNGNPGPPGP PGPSGKDGPK GARGDSGPPG RAGDPGLQGP AGPPGEKGEP GDDGPSGPDG 

       910        920        930        940        950        960 
PPGPQGLAGQ RGIVGLPGQR GERGFPGLPG PSGEPGKQGA PGASGDRGPP GPVGPPGLTG 

       970        980        990       1000       1010       1020 
PAGEPGREGS PGADGPPGRD GAAGVKGDRG ETGAVGAPGA PGPPGSPGPA GPIGKQGDRG 

      1030       1040       1050       1060       1070       1080 
EAGAQGPMGP AGPAGARGMP GPQGPRGDKG ETGEAGERGL KGHRGFTGLQ GLPGPPGPSG 

      1090       1100       1110       1120       1130       1140 
DQGASGPAGP SGPRGPPGPV GPSGKDGANG IPGPIGPPGP RGRSGETGPA GPPGNPGPPG 

      1150       1160       1170       1180       1190       1200 
PPGPPGPGID MSAFAGLGQR EKGPDPLQYM RADEAAGNLR QHDAEVDATL KSLNNQIESL 

      1210       1220       1230       1240       1250       1260 
RSPEGSRKNP ARTCRDLKLC HPEWKSGDYW IDPNQGCTLD AMKVFCNMET GETCVYPNPA 

      1270       1280       1290       1300       1310       1320 
SVPKKNWWSS KSKDKKHIWF GETINGGFHF SYGDDNLAPN TANVQMTFLR LLSTEGSQNI 

      1330       1340       1350       1360       1370       1380 
TYHCKNSIAY LDEAAGNLKK ALLIQGSNDV EIRAEGNSRF TYTVLKDGCT KHTGKWGKTM 

      1390       1400       1410 
IEYRSQKTSR LPIIDIAPMD IGGPEQEFGV DIGPVCFL 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
DAAA02012985 Genomic DNA. No translation available.
DAAA02012986 Genomic DNA. No translation available.
RefSeqNP_001106695.1. NM_001113224.1.
UniGeneBt.21390.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEF1MSR8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSBTAT00000017509; ENSBTAP00000017509; ENSBTAG00000013155.
GeneID407142.
KEGGbta:407142.

Organism-specific databases

CTD1280.

Phylogenomic databases

GeneTreeENSGT00740000114967.
KOK06236.
OrthoDBEOG7TJ3HH.

Family and domain databases

InterProIPR008160. Collagen.
IPR000885. Fib_collagen_C.
[Graphical view]
PfamPF01410. COLFI. 1 hit.
PF01391. Collagen. 8 hits.
[Graphical view]
ProDomPD002078. Fib_collagen_C. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTSM00038. COLFI. 1 hit.
[Graphical view]
PROSITEPS51461. NC1_FIB. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio20818406.

Entry information

Entry nameF1MSR8_BOVIN
AccessionPrimary (citable) accession number: F1MSR8
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: November 16, 2011
Last modified: July 9, 2014
This is version 18 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)