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Protein
Submitted name:

Uncharacterized protein

Gene

PHF21A

Organism
Bos taurus (Bovine)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Enzyme and pathway databases

ReactomeiR-BTA-3214815. HDACs deacetylate histones.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:PHF21AImported
OrganismiBos taurus (Bovine)Imported
Taxonomic identifieri9913 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
Proteomesi
  • UP000009136 Componenti: Chromosome 15

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PaxDbiF1MS13.

Expressioni

Gene expression databases

BgeeiENSBTAG00000009611.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000012652.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini436 – 483PHD-typeInterPro annotationAdd BLAST48

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili510 – 548Sequence analysisAdd BLAST39

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG0383. Eukaryota.
COG0553. LUCA.
GeneTreeiENSGT00530000063984.
InParanoidiF1MS13.
OMAiHEDFCTV.
OrthoDBiEOG091G03CB.
TreeFamiTF331518.

Family and domain databases

Gene3Di3.30.40.10. 1 hit.
InterProiView protein in InterPro
IPR019786. Zinc_finger_PHD-type_CS.
IPR011011. Znf_FYVE_PHD.
IPR001965. Znf_PHD.
IPR019787. Znf_PHD-finger.
IPR013083. Znf_RING/FYVE/PHD.
PfamiView protein in Pfam
PF00628. PHD. 1 hit.
SMARTiView protein in SMART
SM00249. PHD. 1 hit.
SUPFAMiSSF57903. SSF57903. 1 hit.
PROSITEiView protein in PROSITE
PS01359. ZF_PHD_1. 1 hit.
PS50016. ZF_PHD_2. 1 hit.

Sequencei

Sequence statusi: Complete.

F1MS13-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
KRVVEQLRKN LIVKQEQPDK FQIQPLPQSE NKLQTAQQQP LQQLQQQQHH
60 70 80 90 100
HHHAQAAASS PGLTAPQKTV TTASMITTKT LPLVLKAATA TMPASVVGQR
110 120 130 140 150
PTIAMVTAIN SQKAVLSTDV QNTPVNLQTS SKVTGPGAEA VQIVAKNTVT
160 170 180 190 200
LVQATPPQPI KVPQFIPPPR LTPRPNFLPQ VRPKPVAQNN IPIAPAPPPM
210 220 230 240 250
LAAPQLIQRP VMLTKFTPTT LPTSQNSIHP VRVVNGQTAT IAKTFPMAQL
260 270 280 290 300
TSIVIATPGT RLAGPQTVQL SKPSLEKQTV KSHTETDEKQ TESRTVTPPA
310 320 330 340 350
APKPKREENP QKLAFMVSLG LVTHDHLEEE IQSKRQERKR RTTANPVYSG
360 370 380 390 400
AVFEPERKKS AVTYLNSTMH PGTRKRGRPP KYNAVLGFGA LTPTSPPSSH
410 420 430 440 450
PDSPENEKTE TTFTFPASVQ PVSLPSPTST DGDIHEDFCS VCRKSGQLLM
460 470 480 490 500
CDTCSRVYHL DCLDPPLKTI PKGMWICPRC QDQMLKKEEA IPWPGTLAIV
510 520 530 540 550
HSYIAYKAAK EEEKQKLLKW SSDLKQEREQ LEQKVKQLSS SISKCMEMKN
560 570 580 590 600
TILARQKEMH SSLEKVKQLI RLIHGIDLSK PVDSEATVGA LSNGPDCTPP
610 620 630
ANASTSTPAP SPPSSSSQSC TANCNPGEET K
Length:631
Mass (Da):68,952
Last modified:May 3, 2011 - v1
Checksum:i263AFF29C328BBBA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DAAA02041566 Genomic DNA. No translation available.
DAAA02041567 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSBTAT00000012652; ENSBTAP00000012652; ENSBTAG00000009611.

Similar proteinsi

Entry informationi

Entry nameiF1MS13_BOVIN
AccessioniPrimary (citable) accession number: F1MS13
Entry historyiIntegrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: September 27, 2017
This is version 44 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported