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Protein
Submitted name:

T brachyury transcription factor

Gene

TBXT

Organism
Bos taurus (Bovine)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
T brachyury transcription factorImported
Gene namesi
Name:TBXTImported
Synonyms:TImported
OrganismiBos taurus (Bovine)Imported
Taxonomic identifieri9913 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
Proteomesi
  • UP000009136 Componenti: Chromosome 9

Organism-specific databases

VGNCiVGNC:35552 TBXT

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

PTM / Processingi

Proteomic databases

PaxDbiF1MR49

Expressioni

Gene expression databases

BgeeiENSBTAG00000018681

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000024865

Family & Domainsi

Phylogenomic databases

eggNOGiKOG3585 Eukaryota
ENOG410XSTS LUCA
GeneTreeiENSGT00900000140847
InParanoidiF1MR49
KOiK10172
OMAiAPSCVYI
OrthoDBiEOG091G05OC
TreeFamiTF106341

Family and domain databases

CDDicd00182 TBOX, 1 hit
Gene3Di2.60.40.820, 1 hit
InterProiView protein in InterPro
IPR008967 p53-like_TF_DNA-bd
IPR036960 T-box_sf
IPR002070 TF_Brachyury
IPR001699 TF_T-box
IPR018186 TF_T-box_CS
PANTHERiPTHR11267 PTHR11267, 1 hit
PfamiView protein in Pfam
PF00907 T-box, 1 hit
PRINTSiPR00938 BRACHYURY
PR00937 TBOX
SMARTiView protein in SMART
SM00425 TBOX, 1 hit
SUPFAMiSSF49417 SSF49417, 1 hit
PROSITEiView protein in PROSITE
PS01283 TBOX_1, 1 hit
PS01264 TBOX_2, 1 hit
PS50252 TBOX_3, 1 hit

Sequencei

Sequence statusi: Complete.

F1MR49-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTSPGTDSPG KSLQYRVDHL LSAVESELQA GSEKGDPTER ELRVGLEESE
60 70 80 90 100
LWLRFKELTN EMIVTKNGRR MFPVLKVNVS GLDPNAMYSF LLDFVAADNH
110 120 130 140 150
RWKYVNGEWV PGGKPEPQAP SCVYIHPDSP NFGAHWMKAP VSFSKVKLTN
160 170 180 190 200
KLNGGGQIML NSLHKYEPRI HIVRVGGPQR MITSHCFPET QFIAVTAYQN
210 220 230 240 250
EEITALKIKY NPFAKAFLDA KERSDHKDML EEAGDGQQSG YNQWGWLIPG
260 270 280 290 300
TSTLCPPATP HPQFGGPLSL PSTHGCERYP ALRSHRPAPY PTPYAHRNSS
310 320 330 340 350
PTYSDSSSAC LSMLQPHDNW SSLGMSAHTS MLPMGPNAGP PAGSSQYPSL
360 370 380 390 400
WSVSSAAVAP GAQAAGVPSG LGAQFFRGSS AHSAPLAHPV SASSSSGSPL
410 420 430
YEGAATATDV ADSQYDASAQ ARLLASWTAV SPPSM
Length:435
Mass (Da):46,904
Last modified:November 16, 2011 - v2
Checksum:iCA6141CCBAF686A1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DAAA02027491 Genomic DNA No translation available.
RefSeqiNP_001179914.1, NM_001192985.1
UniGeneiBt.106526

Genome annotation databases

EnsembliENSBTAT00000024865; ENSBTAP00000024865; ENSBTAG00000018681
GeneIDi524443
KEGGibta:524443

Similar proteinsi

Entry informationi

Entry nameiF1MR49_BOVIN
AccessioniPrimary (citable) accession number: F1MR49
Entry historyiIntegrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: November 16, 2011
Last modified: March 28, 2018
This is version 55 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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