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F1MJS4 (F1MJS4_BOVIN) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length566 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the phosphohexose mutase family. RuleBase RU004326

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSBTAP00000025308

Sequences

Sequence LengthMass (Da)Tools
F1MJS4 [UniParc].

Last modified November 16, 2011. Version 2.
Checksum: 5B2D4060D679AD96

FASTA56662,196
        10         20         30         40         50         60 
MEEGPLPLLT FTTAPYYDQK PGTSGLRKKT YYFEEKPCYL ENFIQSIFFS IDLKDRQGAS 

        70         80         90        100        110        120 
LVVGGDGRYF NKSAIETIVQ MAAANGIGRL VIGQNGILST PAVSCIIRKI KAIGGIILTA 

       130        140        150        160        170        180 
SHNPGGPNGD FGIKFNISNG GPAPEAITDK IFQISKTIEE YAICPDLHVD LGVLGKQQFD 

       190        200        210        220        230        240 
LENKFKPFTV EIVDSVEAYA TMLRNIFDFN ALKELLSGPN RLKIRIDAMH GVVGPYVKKI 

       250        260        270        280        290        300 
LCEELGAPAN SAVNCVPLED FGGHHPDPNL TYAADLVETM KTGEHDFGAA FDGDGDRNMI 

       310        320        330        340        350        360 
LGKHGFFVNP SDSVAVIAAN IFSIPYFQQT GVRGFARSMP TSGALDRVAN ATKIALYETP 

       370        380        390        400        410        420 
TGWKFFGNLM DASKLSLCGE ESFGTGSDHI REKDGLWAVL AWLSILATRK QSVEDILKDH 

       430        440        450        460        470        480 
WQKYGRNFFT RYDYEEVEAE GANKMMKELE ALISDRSFVG KQFPVGDKVY TVEKIDNFEY 

       490        500        510        520        530        540 
SDPVDGSISR NQGLRLLFAD GSRIIFRLSG TGSAGATIRL YIDSYEKDLA KIYQDPQVML 

       550        560 
APLISIALKV SQLQEKTGRT APTVIT 

« Hide

References

« Hide 'large scale' references
[1]"A whole-genome assembly of the domestic cow, Bos taurus."
Zimin A.V., Delcher A.L., Florea L., Kelley D.R., Schatz M.C., Puiu D., Hanrahan F., Pertea G., Van Tassell C.P., Sonstegard T.S., Marcais G., Roberts M., Subramanian P., Yorke J.A., Salzberg S.L.
Genome Biol. 10:R42-R42(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Hereford Ensembl ENSBTAP00000025308.
[2]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Hereford Ensembl ENSBTAP00000025308.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
DAAA02008562 Genomic DNA. No translation available.
IPIIPI00841149.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSBTAT00000025308; ENSBTAP00000025308; ENSBTAG00000019011.

Phylogenomic databases

GeneTreeENSGT00390000011831.
OMAGRYYNRE.

Gene expression databases

ArrayExpressF1MJS4.

Family and domain databases

Gene3D3.40.120.10. 3 hits.
InterProIPR005844. A-D-PHexomutase_a/b/a-I.
IPR016055. A-D-PHexomutase_a/b/a-I/II/III.
IPR005845. A-D-PHexomutase_a/b/a-II.
IPR005846. A-D-PHexomutase_a/b/a-III.
IPR005843. A-D-PHexomutase_C.
IPR016066. A-D-PHexomutase_CS.
IPR005841. Alpha-D-phosphohexomutase_SF.
[Graphical view]
PfamPF02878. PGM_PMM_I. 1 hit.
PF02879. PGM_PMM_II. 1 hit.
PF02880. PGM_PMM_III. 1 hit.
PF00408. PGM_PMM_IV. 1 hit.
[Graphical view]
PRINTSPR00509. PGMPMM.
SUPFAMSSF53738. A-D-PHexomutase_a/b/a-I/II/III. 2 hits.
PROSITEPS00710. PGM_PMM. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF1MJS4_BOVIN
AccessionPrimary (citable) accession number: F1MJS4
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: November 16, 2011
Last modified: April 3, 2013
This is version 15 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)