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F1MH16 (F1MH16_BOVIN) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length423 AA.
Sequence statusFragment.
Protein existencePredicted

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSBTAP00000000339

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 Ensembl ENSBTAP00000000339

Sequences

Sequence LengthMass (Da)Tools
F1MH16 [UniParc].

Last modified November 16, 2011. Version 2.
Checksum: FE43971FBF6A2DE6

FASTA42348,224
        10         20         30         40         50         60 
VIIMAPELLI LLGAAVILQA DLLPDKKFLL LPPVNFTIKA VNLAQVLLRW EPNPDQEQSN 

        70         80         90        100        110        120 
IQLGYHVKIN APQEEDYETR NTERNLITIL HKGFSASVRT VPWNDHSLQA SSWVSAELKA 

       130        140        150        160        170        180 
PIVFDHLGSP GTEIVNLTCT TNTKADNYTH LRPYQVSLHC TWLVGKDAPD DTQYFLYYRY 

       190        200        210        220        230        240 
RSWIEECQEY SKDVLQRNVA CWFPRTFINS KGRDYLAVYV NGSSKGAAIK PFDQLFALHA 

       250        260        270        280        290        300 
IDRVNSPANV TAEIKGTCLS IHWEKPVSAF PSHCFDYEVK IYNAKKGYFQ TEKMTTNTLI 

       310        320        330        340        350        360 
TIIDDVSKYY IQVRAAVSPV CRATGLWSEW SRPIYVGKDD QKPWTEWFLI AVMMTICFIL 

       370        380        390        400        410        420 
LIFSLICRIC HVWTKLFPPV PGPKSNINDF FVIINNEKTG SSETEVISYA EEAGFETLED 


SVF 

« Hide

References

« Hide 'large scale' references
[1]"A whole-genome assembly of the domestic cow, Bos taurus."
Zimin A.V., Delcher A.L., Florea L., Kelley D.R., Schatz M.C., Puiu D., Hanrahan F., Pertea G., Van Tassell C.P., Sonstegard T.S., Marcais G., Roberts M., Subramanian P., Yorke J.A., Salzberg S.L.
Genome Biol. 10:R42.01-R42.10(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Hereford Ensembl ENSBTAP00000000339.
[2]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Hereford Ensembl ENSBTAP00000000339.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
DAAA02053908 Genomic DNA. No translation available.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSBTAT00000000339; ENSBTAP00000000339; ENSBTAG00000000273.

Phylogenomic databases

GeneTreeENSGT00530000063295.
OMAAPEDTQY.
OrthoDBEOG71P2B1.
TreeFamTF331549.

Family and domain databases

Gene3D2.60.40.10. 2 hits.
InterProIPR003961. Fibronectin_type3.
IPR013783. Ig-like_fold.
IPR015321. IL-6_rcpt_alpha-bd.
IPR003532. Short_hematopoietin_rcpt_2_CS.
[Graphical view]
PfamPF09240. IL6Ra-bind. 1 hit.
[Graphical view]
SMARTSM00060. FN3. 2 hits.
[Graphical view]
SUPFAMSSF49265. SSF49265. 3 hits.
PROSITEPS01356. HEMATOPO_REC_S_F2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF1MH16_BOVIN
AccessionPrimary (citable) accession number: F1MH16
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: November 16, 2011
Last modified: April 16, 2014
This is version 19 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)