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F1MDR2 (F1MDR2_BOVIN) Unreviewed, UniProtKB/TrEMBL

Last modified January 9, 2013. Version 9. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Lymphocyte antigen 6H Ensembl ENSBTAP00000015841
Gene names
Name:LY6H Ensembl ENSBTAP00000015841
OrganismBos taurus (Bovine) [Reference proteome] Ensembl ENSBTAP00000015841
Taxonomic identifier9913 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Laurasiatheria › Cetartiodactyla › Ruminantia › Pecora › Bovidae › Bovinae › Bos

Protein attributes

Sequence length140 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSBTAP00000015841

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
F1MDR2 [UniParc].

Last modified November 16, 2011. Version 2.
Checksum: FA8E6CBFD553C85E

FASTA14014,856
        10         20         30         40         50         60 
MLPAAMKGLG LVLLAALLCS SPAHGLWCQD CTLTTNSSHC TPKQCHPSDT VCATVWITDP 

        70         80         90        100        110        120 
SSSRKDHSVN KMCASSCDFV KRHFFSDYLM GFINSGILKV DVDCCEKDLC NGVAQAGRSP 

       130        140 
WALAGGLLLS LGPALLWAGP

« Hide

References

« Hide 'large scale' references
[1]"A whole-genome assembly of the domestic cow, Bos taurus."
Zimin A.V., Delcher A.L., Florea L., Kelley D.R., Schatz M.C., Puiu D., Hanrahan F., Pertea G., Van Tassell C.P., Sonstegard T.S., Marcais G., Roberts M., Subramanian P., Yorke J.A., Salzberg S.L.
Genome Biol. 10:R42-R42(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Hereford Ensembl ENSBTAP00000015841.
[2]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Hereford Ensembl ENSBTAP00000015841.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		DAAA02037473 Genomic DNA. No translation available.
IPIIPI00718288.
UniGeneBt.104308.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSBTAT00000015841; ENSBTAP00000015841; ENSBTAG00000011939.

Phylogenomic databases

GeneTreeENSGT00610000086181.
OMAAWSMLPA.

Family and domain databases

InterProIPR016054. LY6_UPA_recep-like.
IPR001526. LY6_UPAR.
[Graphical view]
PfamPF00021. UPAR_LY6. 1 hit.
[Graphical view]
SMARTSM00134. LU. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF1MDR2_BOVIN
AccessionPrimary (citable) accession number: F1MDR2
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: November 16, 2011
Last modified: January 9, 2013
This is version 9 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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