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F1MA89

- F1MA89_RAT

UniProt

F1MA89 - F1MA89_RAT

Protein
Submitted name:

Protein Ccny

Gene

Ccny

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 26 (01 Oct 2014)
      Sequence version 2 (03 Apr 2013)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. cyclin-dependent protein serine/threonine kinase regulator activity Source: Ensembl

    GO - Biological processi

    1. G2/M transition of mitotic cell cycle Source: Ensembl
    2. positive regulation of cyclin-dependent protein serine/threonine kinase activity Source: Ensembl
    3. regulation of canonical Wnt signaling pathway Source: Ensembl

    Keywords - Molecular functioni

    CyclinUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein CcnyImported
    Gene namesi
    Name:CcnyImported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
    ProteomesiUP000002494: Chromosome 17

    Organism-specific databases

    RGDi1565969. Ccny.

    Subcellular locationi

    GO - Cellular componenti

    1. cytoplasmic cyclin-dependent protein kinase holoenzyme complex Source: Ensembl
    2. nucleus Source: Ensembl
    3. plasma membrane Source: Ensembl

    PTM / Processingi

    Proteomic databases

    PRIDEiF1MA89.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the cyclin family.UniRule annotation

    Phylogenomic databases

    GeneTreeiENSGT00390000006626.
    OMAiYDKHDPE.
    OrthoDBiEOG7DC24W.
    TreeFamiTF314464.

    Family and domain databases

    Gene3Di1.10.472.10. 1 hit.
    InterProiIPR013763. Cyclin-like.
    IPR006671. Cyclin_N.
    IPR012399. Cyclin_Y.
    [Graphical view]
    PfamiPF00134. Cyclin_N. 1 hit.
    [Graphical view]
    PIRSFiPIRSF028934. Cyclin_CG14939. 1 hit.
    SMARTiSM00385. CYCLIN. 1 hit.
    [Graphical view]
    SUPFAMiSSF47954. SSF47954. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    F1MA89-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGNTTSCCVS SSPKLRRNAH SRLESYRPDT DLSREDTGCN LQHISDRENI    50
    DDLNMEFNPS DHPRASTIFL SKSQTDVREK RKSLFINHHP PGQTSRKYSS 100
    CSTIFLDDST VSQPNLKYTI KCVALAIYYH IKNRDPDGRM LLDIFDENLH 150
    PLSKSEVPPD YDKHNPEQKQ IYRFVRTLFS AAQLTAECAI VTLVYLERLL 200
    TYAEIDICPA NWKRIVLGAI LLASKVWDDQ AVWNVDYCQI LKDITVEDMN 250
    ELERQFLELL QFNINVPSSV YAKYYFDLRS LAEANSLSFP LEPLSRERAH 300
    KLEAISRLCE DKYKDLRKPM RKRSASADNL ILPRWSPAII S 341
    Length:341
    Mass (Da):39,368
    Last modified:April 3, 2013 - v2
    Checksum:iB216D34614559FDF
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06092415 Genomic DNA. No translation available.
    AABR06092416 Genomic DNA. No translation available.
    AABR06092417 Genomic DNA. No translation available.
    AABR06092418 Genomic DNA. No translation available.
    AABR06092419 Genomic DNA. No translation available.
    RefSeqiNP_001178762.1. NM_001191833.1.
    UniGeneiRn.17533.

    Genome annotation databases

    EnsembliENSRNOT00000024545; ENSRNOP00000024545; ENSRNOG00000018123.
    GeneIDi361261.
    KEGGirno:361261.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06092415 Genomic DNA. No translation available.
    AABR06092416 Genomic DNA. No translation available.
    AABR06092417 Genomic DNA. No translation available.
    AABR06092418 Genomic DNA. No translation available.
    AABR06092419 Genomic DNA. No translation available.
    RefSeqi NP_001178762.1. NM_001191833.1.
    UniGenei Rn.17533.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi F1MA89.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSRNOT00000024545 ; ENSRNOP00000024545 ; ENSRNOG00000018123 .
    GeneIDi 361261.
    KEGGi rno:361261.

    Organism-specific databases

    CTDi 219771.
    RGDi 1565969. Ccny.

    Phylogenomic databases

    GeneTreei ENSGT00390000006626.
    OMAi YDKHDPE.
    OrthoDBi EOG7DC24W.
    TreeFami TF314464.

    Miscellaneous databases

    NextBioi 35583166.

    Family and domain databases

    Gene3Di 1.10.472.10. 1 hit.
    InterProi IPR013763. Cyclin-like.
    IPR006671. Cyclin_N.
    IPR012399. Cyclin_Y.
    [Graphical view ]
    Pfami PF00134. Cyclin_N. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF028934. Cyclin_CG14939. 1 hit.
    SMARTi SM00385. CYCLIN. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47954. SSF47954. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
      Rat Genome Sequencing Project Consortium
      Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
      , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
      Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Brown NorwayImported.
    2. "Phosphoproteomic analysis of rat liver by high capacity IMAC and LC-MS/MS."
      Moser K., White F.M.
      J. Proteome Res. 5:98-104(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    3. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: Brown NorwayImported.

    Entry informationi

    Entry nameiF1MA89_RAT
    AccessioniPrimary (citable) accession number: F1MA89
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 3, 2011
    Last sequence update: April 3, 2013
    Last modified: October 1, 2014
    This is version 26 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3