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F1M8W2

- F1M8W2_RAT

UniProt

F1M8W2 - F1M8W2_RAT

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Protein
Submitted name:

Protein Cep250

Gene

Cep250

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 2 out of 5- Protein predictedi

Functioni

GO - Biological processi

  1. centriole-centriole cohesion Source: Ensembl
  2. mitotic cell cycle Source: Ensembl
  3. protein localization Source: Ensembl
  4. regulation of centriole-centriole cohesion Source: Ensembl
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Cep250Imported
Gene namesi
Name:Cep250Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 3

Organism-specific databases

RGDi1562262. Cep250.

Subcellular locationi

GO - Cellular componenti

  1. centriole Source: Ensembl
  2. extracellular vesicular exosome Source: Ensembl
  3. protein complex Source: Ensembl
  4. spindle pole centrosome Source: Ensembl
Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiF1M8W2.

Expressioni

Gene expression databases

ExpressionAtlasiF1M8W2. baseline.

Structurei

3D structure databases

ProteinModelPortaliF1M8W2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00730000110800.
InParanoidiF1M8W2.
OMAiMRLKEQQ.
OrthoDBiEOG7W6WJX.
TreeFamiTF101138.

Family and domain databases

InterProiIPR026048. CEP250.
[Graphical view]
PANTHERiPTHR23159:SF1. PTHR23159:SF1. 1 hit.

Sequencei

Sequence statusi: Fragment.

F1M8W2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
QVLQYRSWCQ DLEKRLEATG GLIPQRWESV EEPNLEQLLI RLEEEQQRCE
60 70 80 90 100
SLVEVNTELR LHMEKADVVN KALQEDVEKL TVDWSRARDE LMRKESQWRM
110 120 130 140 150
EQEFFKGYLR GEHGRLLSVW REVVTFRRHF LKMKSATDRD LTELKAEHAR
160 170 180 190 200
LSGSLLTCCL RLTLRAQSRD SSGSGRSDES EPAQLLLLVA KTQALEKEAH
210 220 230 240 250
EKSQELMQLK SQGDLEKAEL QDRVTELSAL LTQSQKQNKD YEEMVKALRG
260 270 280 290 300
TMEILETNHA ELMEHEASLS RNAQEEKLSL QHVIKDITQA LASVEEEDTV
310 320 330 340 350
TQTPGSENSL QSDYNDLSQF DSQDPNKALT LVHSVLTRRQ QAVQDLRQQL
360 370 380 390 400
SGCQEAMSFL QQQHNQWEEE GKALRERLQK LTGERDALAG QTVDLQGEVD
410 420 430 440 450
SLSNERLGIK PRTLGLSGKH SEDFRERELL QTARGELQQQ LEVLEQEAWR
460 470 480 490 500
LRRVNVELQL QGDSAQGEKL EQQEELHLAV RERERLQETL VGLEAKQSES
510 520 530 540 550
LSELIALREA LESSRLAGEL LKQEQEEVAA ALARAEQSIV ELSSSENSLK
560 570 580 590 600
AEVADLRAAA VKLGALNEAL ALDKVALNQQ LLQLEQENQS MCSRVEAAEQ
610 620 630 640 650
LRSALQVDLA EAERSREALW EEKTHLETQL RKAEETGAEL QAELRGAREE
660 670 680 690 700
KEELKEKLNE AHHQQEAATA QLQQLHQDAE RQEEALARAG QEKEALVRER
710 720 730 740 750
AALEVRLQAV ERDRQDLAEQ VLGLRSAKEQ LEGNLFEAQQ QNSVIQVTKS
760 770 780 790 800
QLEVQIQTII QAKEVIQGEV KCLKLELDTE RSHAEQERDA VARQLAQAEQ
810 820 830 840 850
EGQAALERQK VAHEEEVNRL QEKWEKERAL LQQKLDKTLE TLERERTELE
860 870 880 890 900
MKLREQHTET EALRAQREEE RTQADSALYQ MQLETEKERV SLLETLLQTQ
910 920 930 940 950
KELADASQQL ERLRQDMKVQ KLKEQETTGM LQAQLRGAQQ ELKEAIQQHR
960 970 980 990 1000
DDLAAFQKDK IDLQKQVEDL TSQLVTHNDS QRLVKQEIEE KVREAQECSR
1010 1020 1030 1040 1050
IQKELEKEKA SLTLSLVEKE KRLLVLQEAD SVRQRELVSL RQDIQEAQEG
1060 1070 1080 1090 1100
QRELGVQVEL LRQEVKEKEA DFVAREAQLL EELEASRIAE RQVRASLWAQ
1110 1120 1130 1140 1150
EAKAAQLQLQ LRSTEAQLEA LVAEQQPENQ AQAQLRSLYS VLQQALGSAC
1160 1170 1180 1190 1200
ERRPELRGGG DSVPTPWGSD PDQNGASRLL KRGPLLTALS AEAVALALQK
1210 1220 1230 1240 1250
LHQDLWKAQQ ARDDLRDQVQ KLVQRLTDTE AQKSQVHSEL QDLQRQLSQS
1260 1270 1280 1290 1300
QEEKSKWEGK QNSLESELRD LHETMASLQS RLRQAELQKM EAQNDRELLQ
1310 1320 1330 1340 1350
ASKEKLSAQV EHLQACVTEA RAQASAAGVL EEDLRTARSA LKLKNEEIES
1360 1370 1380 1390 1400
ERERAQALQE QGELKVAQGK ALQENLTLLA QTLSNREREV ETLQAEVQEL
1410 1420 1430 1440 1450
EKQREMQKAA LELLSLDLKK RSREVDLQQE QIQELEQCRS VLEHLPMAVQ
1460 1470 1480 1490 1500
EREQKLSVQR DQIRELENDR EAQRTALEHQ LLDLEQKAQV IESQRGQIQD
1510 1520 1530 1540 1550
LKKQLGTLEC LALELEESHR KVEGQQKVIT ELEGQRELQR VALTHLTLDL
1560 1570 1580 1590 1600
EERSQELQTQ SSQLHELENH STRLAKELQE RDQEVMSQRQ QIEELQKQKE
1610 1620 1630 1640 1650
QLTQDLERKG QELVLQKERI QVLEDQRTLQ TKILEEDLEQ IKHSLRERGQ
1660 1670 1680 1690 1700
ELASQWQLMQ ERAEDGKSPS KAQRGSLEHL KLILRDKEKE VECQQERIQE
1710 1720 1730 1740 1750
LQEHMGQLEQ QLQGLHRKVG ETSLLLTHRE QETATLQQRL QEAKEQGELR
1760 1770 1780 1790 1800
EQVLQGQLEE AQRALAQRDH ELEALRQEQQ QTRGQEESMK QKTSALQAAL
1810 1820 1830 1840 1850
EQAHVTLKER QGELEEHRGQ VQRLQEELIV EGRQVRALEE VLGDLRAESR
1860 1870 1880 1890 1900
EHEKTVLALQ QRCAEQAQEH EAEARTLQDS WLQAQATLAE QEQELEALRA
1910 1920 1930 1940 1950
ENQYSRQQEE AAFGQAEALQ EALSKAQATL QEKEQRLLEQ AELSCTLEAS
1960 1970 1980 1990 2000
TATLQATLDT CQARARQLEE ALRVREGEIQ TQALQHQEAM QHLQQELCQK
2010 2020 2030 2040 2050
EEDLRQLLEK AVAQRSQENG IQEKQSLEQE KEEETRGLLE SLKELQLTVA
2060 2070 2080 2090 2100
QKEEEILMLR EASSPSHRSF PAEKPSLQLL LAQQDLERLQ NALRQTEARE
2110 2120 2130 2140 2150
IEWREKAQGL ALSLAQSKAS ISSLQEIAMF LQASVLERES EQQRLQEELV
2160 2170 2180 2190 2200
LSRQALEEQQ SRGPHSSSRA DQGPKAGQDT EPGEVIEAEP SPGVGEKEQL
2210 2220 2230 2240 2250
RQRLERLQQA VAELEVDRSK LQCHNAQLRT TLEQVERERR KLKRDSLRAS
2260 2270 2280 2290 2300
RAGSLEARET MNSSPTQQDG RGSQRGSSDS MLMVELQREV ALLRAQLALE
2310 2320 2330 2340 2350
RKQRQDYIAR SVQTSRELAG LHHSLSHSLL TVAQAPEATV LEAETKKLDE
2360 2370
SLNQSLTSPA PFLHPSLDTT QNTHR
Length:2,375
Mass (Da):272,463
Last modified:April 3, 2013 - v2
Checksum:i2DFF351CB0D1780A
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06027215 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSRNOT00000026149; ENSRNOP00000026149; ENSRNOG00000019340.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06027215 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortali F1M8W2.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi F1M8W2.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000026149 ; ENSRNOP00000026149 ; ENSRNOG00000019340 .

Organism-specific databases

RGDi 1562262. Cep250.

Phylogenomic databases

GeneTreei ENSGT00730000110800.
InParanoidi F1M8W2.
OMAi MRLKEQQ.
OrthoDBi EOG7W6WJX.
TreeFami TF101138.

Miscellaneous databases

NextBioi 35582722.

Gene expression databases

ExpressionAtlasi F1M8W2. baseline.

Family and domain databases

InterProi IPR026048. CEP250.
[Graphical view ]
PANTHERi PTHR23159:SF1. PTHR23159:SF1. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  2. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.

Entry informationi

Entry nameiF1M8W2_RAT
AccessioniPrimary (citable) accession number: F1M8W2
Entry historyi
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: April 3, 2013
Last modified: October 29, 2014
This is version 26 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3