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Protein
Submitted name:

Charged multivesicular body protein 2B

Gene

Chmp2b

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-RNO-1632852 Macroautophagy
R-RNO-917729 Endosomal Sorting Complex Required For Transport (ESCRT)

Names & Taxonomyi

Protein namesi
Submitted name:
Charged multivesicular body protein 2BImported
Submitted name:
Similar to CGI-84 protein (Predicted)Imported
Gene namesi
Name:Chmp2bImported
Synonyms:RGD1306781_predictedImported
ORF Names:rCG_47011Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 11

Organism-specific databases

RGDi1306781 Chmp2b

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PRIDEiF1M8B7

Expressioni

Gene expression databases

BgeeiENSRNOG00000040257

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000000904

Structurei

3D structure databases

SMRiF1M8B7
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili25 – 55Sequence analysisAdd BLAST31

Sequence similaritiesi

Belongs to the SNF7 family.SAAS annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG3231 Eukaryota
ENOG4111QA0 LUCA
GeneTreeiENSGT00550000074737
KOiK12192
OMAiENMKMGM
OrthoDBiEOG091G0S04
TreeFamiTF314163

Family and domain databases

InterProiView protein in InterPro
IPR005024 Snf7_fam
PfamiView protein in Pfam
PF03357 Snf7, 1 hit

Sequencei

Sequence statusi: Complete.

F1M8B7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASLFKKKTV DDVIKEQNRE LRGTQRAIIR DRAALEKQEK QLELEIKKMA
60 70 80 90 100
KIGNKEACRV LAKQLVHLRK QKTRTFAVSS KVTSMSTQTK VMNSQMKMAG
110 120 130 140 150
AMSTTAKTMQ AVNKKMDPQK TLQTMQNFQK ENMKMEMTEE MINDTLDDIF
160 170 180 190 200
DGSDDEEESQ DIVNQVLDEI GIEISGKMAK APSAARSLPS ASTSKATISD
210
EEIERQLKAL GVD
Length:213
Mass (Da):23,935
Last modified:April 3, 2013 - v2
Checksum:iAC5B40ED59E4489B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07033042 Genomic DNA No translation available.
AABR07033043 Genomic DNA No translation available.
CH474018 Genomic DNA Translation: EDL75910.1
RefSeqiXP_001063932.2, XM_001063932.6
XP_343996.5, XM_343995.8
UniGeneiRn.105547

Genome annotation databases

EnsembliENSRNOT00000000904; ENSRNOP00000000904; ENSRNOG00000040257
GeneIDi363720
KEGGirno:363720

Similar proteinsi

Entry informationi

Entry nameiF1M8B7_RAT
AccessioniPrimary (citable) accession number: F1M8B7
Entry historyiIntegrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: April 3, 2013
Last modified: May 23, 2018
This is version 60 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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