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F1M778

- F1M778_RAT

UniProt

F1M778 - F1M778_RAT

Protein
Submitted name:

Protein LOC100912399

Gene

LOC100912399

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 31 (01 Oct 2014)
      Sequence version 1 (03 May 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. protein serine/threonine kinase activity Source: InterPro
    3. zinc ion binding Source: InterPro

    Keywords - Ligandi

    ATP-bindingUniRule annotation, Metal-binding, Nucleotide-binding, Zinc

    Enzyme and pathway databases

    ReactomeiREACT_195202. FCERI mediated MAPK activation.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein LOC100912399Imported
    Gene namesi
    Name:LOC100912399Imported
    Synonyms:Map3k1Imported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
    ProteomesiUP000002494: Chromosome 2

    Organism-specific databases

    RGDi6487511. LOC100912399.
    620966. Map3k1.

    Expressioni

    Gene expression databases

    ArrayExpressiF1M778.

    Family & Domainsi

    Keywords - Domaini

    Zinc-fingerUniRule annotation

    Phylogenomic databases

    GeneTreeiENSGT00750000117575.
    KOiK04416.
    OMAiSTHFTRM.
    OrthoDBiEOG7MSMNV.
    TreeFamiTF105112.

    Family and domain databases

    Gene3Di3.30.40.10. 1 hit.
    InterProiIPR016024. ARM-type_fold.
    IPR011009. Kinase-like_dom.
    IPR000719. Prot_kinase_dom.
    IPR017441. Protein_kinase_ATP_BS.
    IPR002290. Ser/Thr_dual-sp_kinase_dom.
    IPR008271. Ser/Thr_kinase_AS.
    IPR001841. Znf_RING.
    IPR013083. Znf_RING/FYVE/PHD.
    IPR007527. Znf_SWIM.
    [Graphical view]
    PfamiPF00069. Pkinase. 1 hit.
    PF04434. SWIM. 1 hit.
    [Graphical view]
    SMARTiSM00184. RING. 1 hit.
    SM00220. S_TKc. 1 hit.
    [Graphical view]
    SUPFAMiSSF48371. SSF48371. 1 hit.
    SSF56112. SSF56112. 1 hit.
    PROSITEiPS00107. PROTEIN_KINASE_ATP. 1 hit.
    PS50011. PROTEIN_KINASE_DOM. 1 hit.
    PS00108. PROTEIN_KINASE_ST. 1 hit.
    PS50089. ZF_RING_2. 1 hit.
    PS50966. ZF_SWIM. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F1M778-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAAAAGDRAS SSGFPGAAAA SPEAGGGGGA LQGSGAPAAG AGLLRETGSA     50
    GRERADWRRQ QLRKVRSVEL DQLPEQPLFL TASPPCPSTS PSPEPADAAA 100
    GASGFQPAAG PPPPGAASRC GSHSAELAAA RDSGARSPAG AEPPSAAAPS 150
    GREMENKETL KGLHKMDDRP EERMIREKLK ATCMPAWKHE WLERRNRRGP 200
    VVVKPIPIKG DGSEMSNLAA ELQGEGQAGS AAPAPKGRRS PSPGSSPSGR 250
    SGKPESPGVR RKRVSPVPFQ SGRITPPRRA PSPDGFSPYS PEETSRRVNK 300
    VMRARLYLLQ QIGPNSFLIG GDSPDNKYRV FIGPQNCSCG RGTFCIHLLF 350
    VMLRVFQLEP SDPMLWRKTL KNFEVESLFQ KYHSRRSSRI KAPSRNTIQK 400
    FVSRMSNCHT LSSSSTSTSS SENSIKDEEE QMCPICLLGM LDEESLTVCE 450
    DGCRNKLHHH CMSIWAEECR RNREPLICPL CRSKWRSHDF YSHELSSPVD 500
    SPTSLRGVQQ PSSPQQPVAG SQRRNQESNF NLTHYGTQQI PPAYKDLAEP 550
    WIQAFGMELV GCLFSRNWNV REMALRRLSH DVSGALLLAN GESTGTSGGG 600
    SGGSLSAGAA SGSSQPSISG DVVEACCSVL SIVCADPVYK VYVAALKTLR 650
    AMLVYTPCHS LAERIKLQRL LRPVVDTILV KCADANSRTS QLSISTLLEL 700
    CKGQAGELAV GREILKAGSI GVGGVDYVLS CILGNQAESN NWQELLGRLC 750
    LIDRLLLEFP AEFYPHIVST DVSQAEPVEI RYKKLLSLLA FALQSIDNSH 800
    SMVGKLSRRI YLSSARMVTT VPALFSKLVT MLSASGSSHF ARMRRRLMAI 850
    ADEVEIAEVI QLGSEDTLDG QQDSSQALAP PRYPESSSLE HTAHVEKTGK 900
    GLKATRLSAS SEDISDRLAG VSVGLPSSAT TEQPKPTVQT KGRPHSQCLN 950
    SSPLSPPQLM FPAISAPCSS APSVPAGSVT DASKHRPQAF VPCKIPSASP 1000
    QTQRKFSLQF QRTCSENRDS EKLSPVFTQS RPPPSSNIHR PKPSRPVPGS 1050
    TSKLGDASKN SMTLDLNSAS QCDDSFGSGS NSGGAVIPSE ETAFTPAEDK 1100
    CRLDVNPELN SSIEDLLEAS MPSSDTTVTF KSEVAVLSPE KAESDDTYKD 1150
    DVNHNQKCKE KMEAEEEEAL AIAMAMSASQ DALPIVPQLQ VENGEDIIII 1200
    QQDTPETLPG HTKAKQPYRE DTEWLKGQQI GLGAFSSCYQ AQDVGTGTLM 1250
    AVKQVTYVRN TSSEQEEVVE ALREEIRMMS HLNHPNIIRM LGATCEKSNY 1300
    NLFIEWMAGG SVAHLLSKYG AFKESVVINY TEQLLRGLSY LHENQIIHRD 1350
    VKGANLLIDS TGQRLRIADF GAAARLASKG TGAGEFQGQL LGTIAFMAPE 1400
    VLRGQQYGRS CDVWSVGCAI IEMACAKPPW NAEKHSNHLA LIFKIASATT 1450
    APSIPSHLSP GLRDVALRCL ELQPQDRPPS RELLKHPVFR TTW 1493
    Length:1,493
    Mass (Da):161,283
    Last modified:May 3, 2011 - v1
    Checksum:i9AD531DA6CA0F246
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06012815 Genomic DNA. No translation available.
    RefSeqiXP_006231981.1. XM_006231919.1.
    UniGeneiRn.11081.

    Genome annotation databases

    EnsembliENSRNOT00000017968; ENSRNOP00000017968; ENSRNOG00000013177.
    GeneIDi116667.
    KEGGirno:116667.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06012815 Genomic DNA. No translation available.
    RefSeqi XP_006231981.1. XM_006231919.1.
    UniGenei Rn.11081.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSRNOT00000017968 ; ENSRNOP00000017968 ; ENSRNOG00000013177 .
    GeneIDi 116667.
    KEGGi rno:116667.

    Organism-specific databases

    CTDi 4214.
    RGDi 6487511. LOC100912399.
    620966. Map3k1.

    Phylogenomic databases

    GeneTreei ENSGT00750000117575.
    KOi K04416.
    OMAi STHFTRM.
    OrthoDBi EOG7MSMNV.
    TreeFami TF105112.

    Enzyme and pathway databases

    Reactomei REACT_195202. FCERI mediated MAPK activation.

    Miscellaneous databases

    NextBioi 35582159.
    PROi F1M778.

    Gene expression databases

    ArrayExpressi F1M778.

    Family and domain databases

    Gene3Di 3.30.40.10. 1 hit.
    InterProi IPR016024. ARM-type_fold.
    IPR011009. Kinase-like_dom.
    IPR000719. Prot_kinase_dom.
    IPR017441. Protein_kinase_ATP_BS.
    IPR002290. Ser/Thr_dual-sp_kinase_dom.
    IPR008271. Ser/Thr_kinase_AS.
    IPR001841. Znf_RING.
    IPR013083. Znf_RING/FYVE/PHD.
    IPR007527. Znf_SWIM.
    [Graphical view ]
    Pfami PF00069. Pkinase. 1 hit.
    PF04434. SWIM. 1 hit.
    [Graphical view ]
    SMARTi SM00184. RING. 1 hit.
    SM00220. S_TKc. 1 hit.
    [Graphical view ]
    SUPFAMi SSF48371. SSF48371. 1 hit.
    SSF56112. SSF56112. 1 hit.
    PROSITEi PS00107. PROTEIN_KINASE_ATP. 1 hit.
    PS50011. PROTEIN_KINASE_DOM. 1 hit.
    PS00108. PROTEIN_KINASE_ST. 1 hit.
    PS50089. ZF_RING_2. 1 hit.
    PS50966. ZF_SWIM. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
      Rat Genome Sequencing Project Consortium
      Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
      , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
      Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Brown NorwayImported.
    2. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: Brown NorwayImported.

    Entry informationi

    Entry nameiF1M778_RAT
    AccessioniPrimary (citable) accession number: F1M778
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 3, 2011
    Last sequence update: May 3, 2011
    Last modified: October 1, 2014
    This is version 31 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3