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Protein
Submitted name:

Interferon, lambda 3

Gene

Ifnl3

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-RNO-449836. Other interleukin signaling.

Names & Taxonomyi

Protein namesi
Submitted name:
Interferon, lambda 3Imported
Gene namesi
Name:Ifnl3Imported
Synonyms:Il28bImported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 1

Organism-specific databases

RGDi1589046. Ifnl3.

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 18Sequence analysisAdd BLAST18
ChainiPRO_500326716819 – 192Sequence analysisAdd BLAST174

Proteomic databases

PaxDbiF1M3K4.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000033808.

Family & Domainsi

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG410J0IH. Eukaryota.
ENOG410ZDRD. LUCA.
GeneTreeiENSGT00390000014310.
InParanoidiF1M3K4.
KOiK05447.
OMAiKESLGCL.
OrthoDBiEOG091G0RUH.
TreeFamiTF336172.

Family and domain databases

InterProiView protein in InterPro
IPR029177. INF_lambda.
PfamiView protein in Pfam
PF15177. IL28A. 1 hit.

Sequencei

Sequence statusi: Complete.

F1M3K4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLLLLLLLLA TVLTRTQAHP VPRATRLPVE AKDCNIAQFK SLSPQELQAF
60 70 80 90 100
RKAKDAIEEG LLPKDVRRAS RLLPRDGNLQ QLQVQERQKA LQAEVALTLK
110 120 130 140 150
VLGNMTDPAL VTILGQPLHT LSHIHSQLQT CTEPQPTAEP TPQSRLLSRW
160 170 180 190
LHRLQEAQNK ETPGCLKAYV TLNLFRLLTR DLKCVASGDQ CA
Length:192
Mass (Da):21,443
Last modified:April 3, 2013 - v2
Checksum:iB2A970219E6DE9A5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC110862 Genomic DNA. No translation available.
RefSeqiXP_006223377.1. XM_006223315.1.
XP_006228700.1. XM_006228638.1.

Genome annotation databases

EnsembliENSRNOT00000035328; ENSRNOP00000033808; ENSRNOG00000026584.
GeneIDi685840.
KEGGirno:685840.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC110862 Genomic DNA. No translation available.
RefSeqiXP_006223377.1. XM_006223315.1.
XP_006228700.1. XM_006228638.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000033808.

Proteomic databases

PaxDbiF1M3K4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000035328; ENSRNOP00000033808; ENSRNOG00000026584.
GeneIDi685840.
KEGGirno:685840.

Organism-specific databases

CTDi282617.
RGDi1589046. Ifnl3.

Phylogenomic databases

eggNOGiENOG410J0IH. Eukaryota.
ENOG410ZDRD. LUCA.
GeneTreeiENSGT00390000014310.
InParanoidiF1M3K4.
KOiK05447.
OMAiKESLGCL.
OrthoDBiEOG091G0RUH.
TreeFamiTF336172.

Enzyme and pathway databases

ReactomeiR-RNO-449836. Other interleukin signaling.

Family and domain databases

InterProiView protein in InterPro
IPR029177. INF_lambda.
PfamiView protein in Pfam
PF15177. IL28A. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiF1M3K4_RAT
AccessioniPrimary (citable) accession number: F1M3K4
Entry historyiIntegrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: April 3, 2013
Last modified: June 7, 2017
This is version 33 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.