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Protein
Submitted name:

F-box protein 40

Gene

Fbxo40

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri54 – 96TRAF-typePROSITE-ProRule annotationAdd BLAST43

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Enzyme and pathway databases

ReactomeiR-RNO-8951664 Neddylation
R-RNO-983168 Antigen processing: Ubiquitination & Proteasome degradation

Names & Taxonomyi

Protein namesi
Submitted name:
F-box protein 40Imported
Gene namesi
Name:Fbxo40Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 11

Organism-specific databases

RGDi1309781 Fbxo40

Subcellular locationi

PTM / Processingi

Proteomic databases

PaxDbiF1LXQ1

Expressioni

Gene expression databases

BgeeiENSRNOG00000002459

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000003340

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini54 – 96TRAF-typeInterPro annotationAdd BLAST43
Domaini572 – 626F-boxInterPro annotationAdd BLAST55

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri54 – 96TRAF-typePROSITE-ProRule annotationAdd BLAST43

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG410IEIY Eukaryota
ENOG410ZQ6P LUCA
GeneTreeiENSGT00410000025582
InParanoidiF1LXQ1
KOiK10315
OMAiMLIHFGQ
OrthoDBiEOG091G06SE
TreeFamiTF343227

Family and domain databases

Gene3Di3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR036047 F-box-like_dom_sf
IPR001810 F-box_dom
IPR031890 Fbxo30/Fbxo40
IPR008974 TRAF-like
IPR013083 Znf_RING/FYVE/PHD
IPR001293 Znf_TRAF
PANTHERiPTHR15933 PTHR15933, 1 hit
PfamiView protein in Pfam
PF15966 F-box_4, 1 hit
PF15965 zf-TRAF_2, 1 hit
SUPFAMiSSF49599 SSF49599, 1 hit
SSF81383 SSF81383, 1 hit
PROSITEiView protein in PROSITE
PS50181 FBOX, 1 hit
PS50145 ZF_TRAF, 1 hit

Sequencei

Sequence statusi: Complete.

F1LXQ1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRARRPPPA LHRHCEGCID RHCRVPAEPS VSCLVISCHL LCGATFHMCK
60 70 80 90 100
ESEHTLLCPL EQVPCLNSEY GCPLSMARHK LAKHLQVCPA SVVCCSMEWN
110 120 130 140 150
RWPNVDSETV LHENIMKESP SEECLDTALA LQDQKVLFRS LKMVELFPET
160 170 180 190 200
RDATEEEPAM NGDTSWEETA GAVGGVDAGL VPNSCLPATN GQTMELSQEE
210 220 230 240 250
RDALAKTKEG MDLDKFGKWE SMFSKEHAAS VLTGSSGKSE DKNENVSGKE
260 270 280 290 300
QRSGDGSTGD AECSTERRGP QESPKPQEPP TTIEMTGLAP WQDGVLERLK
310 320 330 340 350
TAVDAKDYNM YLVHNGRMLI HFGQMPACTP KERDFVYGNL EAQEVKTVYT
360 370 380 390 400
FKIPVSYCGK RARLGDAMLR CRPSEHKAVD TSDLGISVED LPKSDLIKTT
410 420 430 440 450
LQCALERELK GHVISESRSI DGLFMDLATQ TYNFESEQFS SETVLADLLG
460 470 480 490 500
TTQSGGLHVE LHSECVTRRH NKSSSAFTFT CNKFFRRDEF PLHFKNVHTD
510 520 530 540 550
IQSCLNGWFQ HRCPLAYLGC TFVQNHFRPP GQKAKVIYSQ ELKTFAIKPE
560 570 580 590 600
VAPELSEKWK SDHLSGRDGK SLNSLTSLPL EVLQYIAGFL DSISLSQLSQ
610 620 630 640 650
VSVLMRNICA TLLQERGMVL LQWKKKRYSH GGTSWKVHNQ IWQFSSLFSK
660 670 680 690 700
IKSWEFNDVT SMSEHLKTCP FNVVEHKTDP IRLTSMCQPQ EQARESLVST
710
FRARPRGRHS
Length:710
Mass (Da):79,686
Last modified:April 3, 2013 - v2
Checksum:i1016A32BC725EC2E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07034346 Genomic DNA No translation available.
RefSeqiXP_006248466.1, XM_006248404.3
XP_008774915.1, XM_008776693.2
UniGeneiRn.138743

Genome annotation databases

EnsembliENSRNOT00000003340; ENSRNOP00000003340; ENSRNOG00000002459
GeneIDi363790
KEGGirno:363790

Similar proteinsi

Entry informationi

Entry nameiF1LXQ1_RAT
AccessioniPrimary (citable) accession number: F1LXQ1
Entry historyiIntegrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: April 3, 2013
Last modified: May 23, 2018
This is version 52 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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