Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Protein Btaf1

Gene

Btaf1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Btaf1Imported
Gene namesi
Name:Btaf1Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 1

Organism-specific databases

RGDi1564130. Btaf1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2222Sequence analysisAdd
BLAST
Chaini23 – 18551833Sequence analysisPRO_5003266077Add
BLAST

Proteomic databases

PaxDbiF1LW16.
PRIDEiF1LW16.

PTM databases

iPTMnetiF1LW16.
PhosphoSiteiF1LW16.

Expressioni

Gene expression databases

BgeeiENSRNOG00000017938.
ExpressionAtlasiF1LW16. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000024465.

Structurei

3D structure databases

ProteinModelPortaliF1LW16.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1284 – 1459176Helicase ATP-bindingInterPro annotationAdd
BLAST
Domaini1642 – 1796155Helicase C-terminalInterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG0387. Eukaryota.
ENOG410XP4Z. LUCA.
GeneTreeiENSGT00630000089754.
InParanoidiF1LW16.
KOiK15192.
OMAiREEDMVD.
OrthoDBiEOG091G00E4.
TreeFamiTF300546.

Family and domain databases

Gene3Di1.25.10.10. 5 hits.
3.40.50.300. 1 hit.
InterProiIPR011989. ARM-like.
IPR016024. ARM-type_fold.
IPR022707. DUF3535.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
IPR000330. SNF2_N.
[Graphical view]
PfamiPF12054. DUF3535. 1 hit.
PF00271. Helicase_C. 1 hit.
PF00176. SNF2_N. 1 hit.
[Graphical view]
SMARTiSM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
[Graphical view]
SUPFAMiSSF48371. SSF48371. 5 hits.
SSF52540. SSF52540. 2 hits.
PROSITEiPS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F1LW16-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGYQACPVFL LILDRLFILL DTGTTPVTRK AAAQQLGEVV KLHPHELNNL
60 70 80 90 100
LSKVLIYLRS ANWDTRIAAG QAVEAIVKNV PEWNPVPRTK QEPTECSMED
110 120 130 140 150
SSTTDRLNFD RFDICRLLQH GASLLGSAGA EFEVQDEKSG EVDPKERIAR
160 170 180 190 200
QRKLLQKKLG LNMGEAIGMS TEELFNDEDL DYTPTSAALV NKQSTLQAAE
210 220 230 240 250
LIDSEFRAGM SNRQKNKAKR MAKLFAKQRS RDAVETNEKS NDSTDGEPEE
260 270 280 290 300
KRRKVANVVI NQTASDAKVL IDNVPESSSF IEETNEWPLE SFCEELCNDL
310 320 330 340 350
FNPSWEVRHG AGTGLREILK AHGKSGGKMG DSTLEEMIQQ HQEWLEDLVI
360 370 380 390 400
RLLCVFALDR FGDFVSDEVV APVRETCAQT LGVVLKHMNE TGVHKTVDVL
410 420 430 440 450
LKLLTQEQWE VRHGGLLGIK YALAVRQDVI NTLLPKVLTR IIEGLQDLDD
460 470 480 490 500
DVRAVAAASL VPVVESLVYL QTQKVPSIIN TLWDSLLELD DLTASTNSIM
510 520 530 540 550
TLLSSMLTYP QVQQCSIQQS LTVLVPRVWP FLHHTISSVR RAALETLFTL
560 570 580 590 600
LSTQDQNSSS WLIPILSDML RHIFQFCVLE SSQEILDLIH KVWMELLSKA
610 620 630 640 650
SVQYVVAAAC PWMGAWLCLM MQPSHLPIDL NMLLEVKART KEKTGGKVRQ
660 670 680 690 700
GQMQSKEVLQ EYIAGADTIM EDPATRDFVV MRARMMAAKL LGALCCCICD
710 720 730 740 750
PGVNMVNQEI KPAESLGQLL LFHLNSKSAL QRISAALVIC EWAALQKECK
760 770 780 790 800
AVTLAVQPRL LDILSEHLYY DEIAVPFTRM QNECKQFISS LADAHIEVGN
810 820 830 840 850
RVNNNVLTID QANDLVTTLF NEVTSTFDLN PQVLQQLDSK RHQVQMTVAE
860 870 880 890 900
TNQEWQVLQL RVHTFAACAV VSLQQLPEKL NPIIKPLMET IKKEENTLVQ
910 920 930 940 950
NYAAQYIAKL LQQCTTRTPC PNSKVIKNLC SSLCVDPYLT PCVTCPVPTQ
960 970 980 990 1000
SGQENSKGSN SEKDGMHHTV TKHRGIITLY RHQKAAFAIT SRRGPIPKAI
1010 1020 1030 1040 1050
KAQIADLPAG SSGNILVELD EGQKPYLVQR RGAEFALTTV VKHFGAEMAL
1060 1070 1080 1090 1100
KLPHLWDAMV GPLKTMIDLN NFDGKSLLER GDAPAQELVN SLQVFETAAA
1110 1120 1130 1140 1150
SMDSELHPLL VQHLPHLYMC LQYPSTAVRH MAARCVGVMS KIATMETMNI
1160 1170 1180 1190 1200
FLEKVLPWLG AIDDNVKQEG AIEALACVME QLDVGIVPYI VLLVVPVLGR
1210 1220 1230 1240 1250
MSDQTDSVRF MATQCFATLI RLMPLEAGIP DPPNMSEELI QLKAKERHFL
1260 1270 1280 1290 1300
EQLLDGKKLE NYKIPVPINA ELRKYQQDGV NWLAFLNKYK LHGILCDDMG
1310 1320 1330 1340 1350
LGKTLQSICI LAGDHCQRAQ EYARSKLAEC MPLPSLVVCP PTLTGHWVDE
1360 1370 1380 1390 1400
VGKFCSREYL NPLHYTGPPT ERIRLQHQVK RHNLIVASYD VVRNDIDFFR
1410 1420 1430 1440 1450
NIKFNYCILD EGHVIKNGKT KLSKAVKQLT ANYRIILSGT PIQNNVLELW
1460 1470 1480 1490 1500
SLFDFLMPGF LGTERQFAAR YGKPILASRD ARSSSREQEA GVLAMDALHR
1510 1520 1530 1540 1550
QVLPFLLRRM KEDVLQDLPP KIIQDYYCTL SPLQVQLYED FAKSRAKCDV
1560 1570 1580 1590 1600
DETVSSAALS EETEKPKLKA TGHVFQALQY LRKLCNHPAL VLTPQHPEFK
1610 1620 1630 1640 1650
NTTEKLAVQN SSLHDIQHAP KLSALKQLLL DCGLGNGTSS ESGTESVVAQ
1660 1670 1680 1690 1700
HRILIFCQLK SMLDIVEHDL LKPHLPSVTY LRLDGSIPPG QRHSIVSRFN
1710 1720 1730 1740 1750
NDPSIDVLLL TTHVGGLGLN LTGADTVVFV EHDWNPMRDL QAMDRAHRIG
1760 1770 1780 1790 1800
QKRVVNVYRL ITRGTLEEKI MGLQKFKMNI ANTVISQENS SLQSMGTDQL
1810 1820 1830 1840 1850
LDLFTLDKDG KAEKADSSTS GKASMKSVLE NLSDLWDAEQ YDSEYNLETF

MRSLE
Length:1,855
Mass (Da):207,722
Last modified:April 3, 2013 - v2
Checksum:iF449709F514D2B54
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC094246 Genomic DNA. No translation available.
RefSeqiNP_001178846.1. NM_001191917.1.
UniGeneiRn.1237.

Genome annotation databases

EnsembliENSRNOT00000024465; ENSRNOP00000024465; ENSRNOG00000017938.
GeneIDi368042.
KEGGirno:368042.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC094246 Genomic DNA. No translation available.
RefSeqiNP_001178846.1. NM_001191917.1.
UniGeneiRn.1237.

3D structure databases

ProteinModelPortaliF1LW16.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000024465.

PTM databases

iPTMnetiF1LW16.
PhosphoSiteiF1LW16.

Proteomic databases

PaxDbiF1LW16.
PRIDEiF1LW16.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000024465; ENSRNOP00000024465; ENSRNOG00000017938.
GeneIDi368042.
KEGGirno:368042.

Organism-specific databases

CTDi9044.
RGDi1564130. Btaf1.

Phylogenomic databases

eggNOGiKOG0387. Eukaryota.
ENOG410XP4Z. LUCA.
GeneTreeiENSGT00630000089754.
InParanoidiF1LW16.
KOiK15192.
OMAiREEDMVD.
OrthoDBiEOG091G00E4.
TreeFamiTF300546.

Gene expression databases

BgeeiENSRNOG00000017938.
ExpressionAtlasiF1LW16. baseline and differential.

Family and domain databases

Gene3Di1.25.10.10. 5 hits.
3.40.50.300. 1 hit.
InterProiIPR011989. ARM-like.
IPR016024. ARM-type_fold.
IPR022707. DUF3535.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
IPR000330. SNF2_N.
[Graphical view]
PfamiPF12054. DUF3535. 1 hit.
PF00271. Helicase_C. 1 hit.
PF00176. SNF2_N. 1 hit.
[Graphical view]
SMARTiSM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
[Graphical view]
SUPFAMiSSF48371. SSF48371. 5 hits.
SSF52540. SSF52540. 2 hits.
PROSITEiPS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiF1LW16_RAT
AccessioniPrimary (citable) accession number: F1LW16
Entry historyi
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: April 3, 2013
Last modified: September 7, 2016
This is version 39 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.