Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

RELT, TNF receptor

Gene

Relt

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionReceptorImported

Names & Taxonomyi

Protein namesi
Submitted name:
RELT, TNF receptorImported
Submitted name:
Tumor necrosis factor receptor superfamily, member 19-like (Predicted), isoform CRA_aImported
Gene namesi
Name:ReltImported
Synonyms:Tnfrsf19l_predictedImported
ORF Names:rCG_40626Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 1

Organism-specific databases

RGDi1305381 Relt

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei161 – 184HelicalSequence analysisAdd BLAST24

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 24Sequence analysisAdd BLAST24
ChainiPRO_501408910525 – 427Sequence analysisAdd BLAST403

Expressioni

Gene expression databases

BgeeiENSRNOG00000025075

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000036110

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini51 – 90TNFR-CysInterPro annotationAdd BLAST40

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili225 – 249Sequence analysisAdd BLAST25

Keywords - Domaini

Coiled coilSequence analysis, SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410IKJV Eukaryota
ENOG410YDMP LUCA
GeneTreeiENSGT00530000063385
KOiK05156
OMAiHHLHTVQ
TreeFamiTF332339

Family and domain databases

CDDicd13419 TNFRSF19L, 1 hit
InterProiView protein in InterPro
IPR022248 TNF_rcpt_RELT
IPR001368 TNFR/NGFR_Cys_rich_reg
IPR022333 TNFR_19-like
IPR034048 TNFRSF19L_N
PANTHERiPTHR23097:SF37 PTHR23097:SF37, 1 hit
PfamiView protein in Pfam
PF12606 RELT, 1 hit
PRINTSiPR01970 TNFACTORR19L
SMARTiView protein in SMART
SM00208 TNFR, 1 hit

Sequencei

Sequence statusi: Complete.

F1LVW5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKRTLLCWPL SCLFVLLPWP LATPTPITPW LCPPGTEPDP DPGQGTLCRT
60 70 80 90 100
CPPGTFSASL DSYPCQPHYR CGLQKRLEAQ AGTATHDTVC GDCQRGWFGP
110 120 130 140 150
QGVPHVPCQP CSKATPSTSD CDGRRARRGV EVAAGANSNG ELRQPGNGTR
160 170 180 190 200
AGGPEETAAQ YAVIAIVPVF CLMGLLGILV CNLLKRKGYH CTAQKEVGPS
210 220 230 240 250
PGGGGSGINP AYRTEDANED TIGVLVRLIT EKKENAAALE ELLKEYHSKQ
260 270 280 290 300
LVQTSHRPVP RLLPASPSTP HVCPHHHHLH TVQGLASLSG PCCSRCSQKW
310 320 330 340 350
PEVLLSPEAA AATTPAPTLL PSTSRAPKAS AKPGRQGEIT ILSVGRFRVA
360 370 380 390 400
RIPEQRTSSL LSEVKTITEA GPSESDLPES PQPGLPPEQR ALLGSSGSHA
410 420
KWLKPPAENK AEENRYVVRL SESNLVI
Length:427
Mass (Da):45,552
Last modified:April 3, 2013 - v2
Checksum:i2C619976B8058B1E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07004886 Genomic DNA No translation available.
CH473956 Genomic DNA Translation: EDM18311.1
RefSeqiNP_001101965.1, NM_001108495.1
XP_006229839.1, XM_006229777.3
XP_006229840.1, XM_006229778.3
XP_008757985.1, XM_008759763.2
XP_008757986.1, XM_008759764.2
XP_008757987.1, XM_008759765.2
UniGeneiRn.16770

Genome annotation databases

EnsembliENSRNOT00000038408; ENSRNOP00000036110; ENSRNOG00000025075
ENSRNOT00000077661; ENSRNOP00000074394; ENSRNOG00000025075
GeneIDi361615
KEGGirno:361615

Similar proteinsi

Entry informationi

Entry nameiF1LVW5_RAT
AccessioniPrimary (citable) accession number: F1LVW5
Entry historyiIntegrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: April 3, 2013
Last modified: March 28, 2018
This is version 58 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health