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Protein
Submitted name:

WD repeat domain 19

Gene

Wdr19

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-RNO-5610787 Hedgehog 'off' state
R-RNO-5620924 Intraflagellar transport

Names & Taxonomyi

Protein namesi
Submitted name:
WD repeat domain 19Imported
Gene namesi
Name:Wdr19Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 14

Organism-specific databases

RGDi1306997 Wdr19

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PaxDbiF1LV01
PRIDEiF1LV01

PTM databases

iPTMnetiF1LV01
PhosphoSitePlusiF1LV01

Expressioni

Gene expression databases

BgeeiENSRNOG00000002932
GenevisibleiF1LV01 RN

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000003991

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini79 – 175WD_REPEATS_REGIONInterPro annotationAdd BLAST97

Keywords - Domaini

WD repeatPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG2247 Eukaryota
ENOG410XR20 LUCA
GeneTreeiENSGT00590000083165
InParanoidiF1LV01
KOiK19671
OMAiCLHSDYA
OrthoDBiEOG091G0UG9
TreeFamiTF314758

Family and domain databases

Gene3Di2.130.10.10, 2 hits
InterProiView protein in InterPro
IPR011990 TPR-like_helical_dom_sf
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR017986 WD40_repeat_dom
SMARTiView protein in SMART
SM00320 WD40, 5 hits
SUPFAMiSSF48452 SSF48452, 1 hit
PROSITEiView protein in PROSITE
PS50294 WD_REPEATS_REGION, 1 hit

Sequencei

Sequence statusi: Complete.

F1LV01-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKRVFSLLEK TWLGAPIQFA WQKSSGNYLA VTGADSVVKI FDRHGQKRSE
60 70 80 90 100
ISLPGNCVAM DWDKDGDILA VIAEKSSCIY LWDANTNKTS QLDNGMRDQM
110 120 130 140 150
SFLLWSKIGS FLAVGTIKGN LLIYNHQTSR KIPVLGKHTK KITCGCWNTE
160 170 180 190 200
NLLALGGEDR MITVSNQEGD TIRQTPVKSE PSDIKFSTSK TDERISSAES
210 220 230 240 250
TISAVVGKKM LFLFHLNEPD NPVDLEFQQA YGNIVCYSWY GDGYIMIGFS
260 270 280 290 300
RGTFLAISTH FPEVGQEIFK TRDHKDNLTS VALSQTLNKA ATCGDNCIKI
310 320 330 340 350
HDLTELRDMY AIINLDDENK GLGTLSWTDD GQLLALSTQR GSLHVFLTKL
360 370 380 390 400
PILGDACHTR IAYLTSLLEV TVANLIEGEP PITVSVDVEP NFVAVGLYHL
410 420 430 440 450
AVGMNNRAWF YVLGENVVKK LKDVEYLGTV ASICLHSDYA AALFEGKIQL
460 470 480 490 500
HLIENEMLDA QEERETRLFP AVDDKCRILC HALTSDFLIY GTDTGIIQYF
510 520 530 540 550
FIEDWQFVND YRHPVGVKKL FPDPNGTRLV FIDEKSDGFV YCPVNDATYE
560 570 580 590 600
IPDFSPTIKG VLWENWPMDK GVFIAYDDDK VYTYVFHKDT IQGSKVILAG
610 620 630 640 650
GTKLPFSHKP LLLYNGELTC QTQSGKINSI YLSTHSFLDS VKDTEPPDLR
660 670 680 690 700
QMLMQTLMLK RFPDAWDICK MLNDRTSWSE LARACLHHME VEFAIRVSRT
710 720 730 740 750
MGDVGTVMSL EQIKGIEDYN LLAGHLAMFT NDFNLAQDLY LASNCPVAAL
760 770 780 790 800
EMRRDLQHWD SALQLAKRLA PDQIPFISKE YAIQLEFTGD YVNALAHYEK
810 820 830 840 850
GITGDNKEHD EVCLAGVAQM SIRMGDIRRG ANQALKHPSR VLKRDCGAIL
860 870 880 890 900
ENMKQFSEAA QLYEKGQYYD RAASVYIRCK NWAKVGELLP HVSSPKIHLQ
910 920 930 940 950
YAKAKEADGR YKEAVVAYEN AKQWNSVIRI YLDHLNNPEK AVSIVRETQS
960 970 980 990 1000
LDGAKMVARF FLQLGDYGSA IQFLVLSKCN NEAFTLAQQH NKMEIYADII
1010 1020 1030 1040 1050
GAEDTTNEDY QSIALYFEGE KRHFQAGKFF LLCGQYSRAL KHFLKCPSSE
1060 1070 1080 1090 1100
DNVAIEMAIE TVGQAKDELL TNQLIDHLMG ESDGMPKDAK YLFRLYMALK
1110 1120 1130 1140 1150
QYREAARTAI IIAREEQSAG NYRNAHDVLF SMYAELKSQK IKIPSEMATN
1160 1170 1180 1190 1200
LMILHSYILV KIHVKSGDHM KGARMLIRVA NNISKFPSHI VPILTSTVIE
1210 1220 1230 1240 1250
CHRAGLKNSA FSFAAMLMRP EYRNKIDAKY KKKIEAMVRR PDTSETEEAT
1260 1270 1280 1290 1300
TPCPFCQFLL PECELLCPGC KNNIPYCIAT GRHMLKDDWT MCPHCGFPAL
1310 1320 1330 1340
YSEFKILLNS ESTCPMCSER LNSSQLKKIT DCTQYLRTET E
Length:1,341
Mass (Da):151,476
Last modified:April 3, 2013 - v2
Checksum:iADB08F93295EAD77
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07015005 Genomic DNA No translation available.
AABR07015006 Genomic DNA No translation available.
RefSeqiNP_001178608.2, NM_001191679.2
UniGeneiRn.18220

Genome annotation databases

EnsembliENSRNOT00000003991; ENSRNOP00000003991; ENSRNOG00000002932
GeneIDi305349
KEGGirno:305349

Similar proteinsi

Entry informationi

Entry nameiF1LV01_RAT
AccessioniPrimary (citable) accession number: F1LV01
Entry historyiIntegrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: April 3, 2013
Last modified: March 28, 2018
This is version 59 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health