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F1LU96

- F1LU96_RAT

UniProt

F1LU96 - F1LU96_RAT

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Protein
Submitted name: Protein Nckap5
Gene
Nckap5
Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Nckap5Imported
Gene namesi
Name:Nckap5Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 13

Organism-specific databases

RGDi1564507. Nckap5.

PTM / Processingi

Proteomic databases

PRIDEiF1LU96.

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00530000063607.
OMAiDSLFGWE.
OrthoDBiEOG7PGDQM.
TreeFamiTF331208.

Family and domain databases

InterProiIPR026163. Nckap5l.
[Graphical view]
PANTHERiPTHR21740. PTHR21740. 1 hit.

Sequencei

Sequence statusi: Fragment.

F1LU96-1 [UniParc]FASTAAdd to Basket

« Hide

HEKLIHELEE ERQLRLQSEE RLREVTLESE RNRIQMLGLQ QQFSRMEETV     50
RSLLQSQGSP EQKKEEPAKI TAYQERVSEE ERKEQAALGD LRVEADEDSR 100
SEHSSTEGGK EDSRLLLKRL KALEAENSAL ALENENQREQ YERCLDEVAN 150
QVVRALLTQK DLREECVKLK TRVFDLEQQN RALSILFQQR VRPASDVLLQ 200
EHLQNAKSGA PALKHSGSGV VIPDHPCPRN SCSSGSELSL SSTCSEYSSG 250
SSYTWQDRKL NGKRQTSQIW DKRLSIDSSL PSGFTSPADE LPPTRIKESH 300
ILEGLRKLQK RKVLLESPAS VMSKWGYKDC MNSNEGIYSP GIKNSSLKEC 350
PPCQSPGRGI PCQNLHQTFN YDANSHEYAH EEFLSSASPR TSPSQGCRIQ 400
SSKLTHSVSD SLFTWEPHRK YFAEGTASVY TREMPERLTR CASHCPLERK 450
LCPSVHLPWV QRDRDPHSQG PGHVPLNLQL SDTDDNETLH ELHIESSDER 500
SPSDLSLTGD TDRSMENLGV KFGKSECVSH DKGKEECPTH LETSPKAFSF 550
IKQQRVVKRT SSEECVTVIF DAENGEPVEF SSHQAGVVTV TRDEISISST 600
PAGPSEELTE LSPQGITHFQ PGATARDYPF LGRPEEEPKT NIPKDENGIL 650
TAPNDSFNSP TTVTQNSPRP KLVKPTQGVA WQSNSRSVAN MSVYTKQGLT 700
KIPSRSKISP QKSKLVDPMP TTLVPSSGLG TLAKTPASPT GKLSQCTNAE 750
SPGTFCDVQP ESHIPKHPTQ LPHIPKISNK KNWVQCPKSQ TAGIQSRHLM 800
GKSDNGESPT RAKRCGSEPK TRMRSPSPPT PPGRSVSLLV RPSYDYPPLP 850
SPAKPETKAP GDTVSTGLKS PVLKGSSAPL VSSSPAMSEI QKKPSVASRK 900
SAFPTALPST QAVVHTRYPE HTSSSPFAVT APGPTKVSPK RGIPKAPHPQ 950
ALGTTHMDTD LQTPKTRPSS YELLEMTSCK NLSPGRKGQL SDSTVTPHRP 1000
SFSGPNEFLT PQVNSTSSSS SSCRNQGTSQ GGQNPPEKGP KTRLPVGLRV 1050
LMKSPQLLRK TSMVPGKQEK DSLNEASRSS VTANKSNPED SKDPASLETS 1100
RDERTTALLG LRGPESLARG LGLESTPPES LESSISRDDG RDGVDSRAIK 1150
RSFSSSKPHL KPALGMNGAK ARSQSFSFHL GEKPSTPPIE GPGKIRTQII 1200
TNTAERGNSL TRQNISMEGS PSKTPSVSTP DNLPNAGRPL GNPFSRQGSL 1250
CSTGSSSSQH GSPSKLPLRM LTRPEGLLTP EEEDQRFSTQ EECPGRGVHE 1300
QSSSNHHRHP SSTLSDCPQS LQVPGRIQRP SNLETNGISK LETSGRHPDA 1350
SPTGTSVVSP EAPLSPSIEE KVMLCIQENV EKGQAQTKSA SVEVKPRAGP 1400
SFTSWFGFRK SRLPALSSRR MEASKSKVEK KDTKLKSERK KEKKKAEVQS 1450
KRENELSRGT KKADGQSPDD GLQNTESLKA TQDIYNQMKS EPRNRPSPAV 1500
SPTKDAFMTE LLNRVDKRAA LQTESGSKGV SCRSVLEGTS QGSCFASGSV 1550
STQGSQKKNI KTKVDMEKPR ESLGAEVDED VREDEEDRVA DAALQSHVIE 1600
SNCQMRTLDS GIGTFPLPDS GNRSMGRYIC QQDSPEDTDP LLPLQPAPSM 1650
PSSARAQTLD REVPSSTDSQ SSSESTIIHS VSDPSMMARG IRASQSHLPK 1700
PTTSGKTSFE KQNGAESKAT TGPSFEYAED AVPSEPLSGW RGEDATTENQ 1750
ELKQVEETKE DPENRLSEIS LESFNKFNSN TVILLEKEQS PSEVEGQKEE 1800
KGKETEVSLS SSDRPGVDHV ESLSDSLYDS FSSCASQTSN A 1841
Length:1,841
Mass (Da):201,179
Last modified:April 3, 2013 - v2
Checksum:iF0DABAA5AB262B2E
GO

Non-terminal residue

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06074412 Genomic DNA. No translation available.
AABR06074413 Genomic DNA. No translation available.
AABR06074414 Genomic DNA. No translation available.
AABR06074415 Genomic DNA. No translation available.
AABR06074416 Genomic DNA. No translation available.
AABR06074417 Genomic DNA. No translation available.
AABR06074418 Genomic DNA. No translation available.
AABR06074419 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSRNOT00000038020; ENSRNOP00000029665; ENSRNOG00000021553.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06074412 Genomic DNA. No translation available.
AABR06074413 Genomic DNA. No translation available.
AABR06074414 Genomic DNA. No translation available.
AABR06074415 Genomic DNA. No translation available.
AABR06074416 Genomic DNA. No translation available.
AABR06074417 Genomic DNA. No translation available.
AABR06074418 Genomic DNA. No translation available.
AABR06074419 Genomic DNA. No translation available.

3D structure databases

ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi F1LU96.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000038020 ; ENSRNOP00000029665 ; ENSRNOG00000021553 .

Organism-specific databases

RGDi 1564507. Nckap5.

Phylogenomic databases

GeneTreei ENSGT00530000063607.
OMAi DSLFGWE.
OrthoDBi EOG7PGDQM.
TreeFami TF331208.

Miscellaneous databases

NextBioi 35577685.

Family and domain databases

InterProi IPR026163. Nckap5l.
[Graphical view ]
PANTHERi PTHR21740. PTHR21740. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  2. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.

Entry informationi

Entry nameiF1LU96_RAT
AccessioniPrimary (citable) accession number: F1LU96
Entry historyi
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: April 3, 2013
Last modified: February 19, 2014
This is version 18 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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