F1LU96 (F1LU96_RAT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Protein Nckap5 Ensembl ENSRNOP00000029665

Gene names

Name:

Nckap5 Ensembl ENSRNOP00000029665 RGD 1564507

Organism

Rattus norvegicus (Rat) [Reference proteome] Ensembl ENSRNOP00000029665

Taxonomic identifier

10116 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length	1841 AA.
Sequence status	Fragment.
Protein existence	Predicted

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSRNOP00000029665

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	Ensembl ENSRNOP00000029665

Sequences

	Sequence		Length	Mass (Da)
	F1LU96 [UniParc]. Last modified April 3, 2013. Version 2. Checksum: F0DABAA5AB262B2E	FASTA	1,841	201,179
	10 20 30 40 50 60 HEKLIHELEE ERQLRLQSEE RLREVTLESE RNRIQMLGLQ QQFSRMEETV RSLLQSQGSP 70 80 90 100 110 120 EQKKEEPAKI TAYQERVSEE ERKEQAALGD LRVEADEDSR SEHSSTEGGK EDSRLLLKRL 130 140 150 160 170 180 KALEAENSAL ALENENQREQ YERCLDEVAN QVVRALLTQK DLREECVKLK TRVFDLEQQN 190 200 210 220 230 240 RALSILFQQR VRPASDVLLQ EHLQNAKSGA PALKHSGSGV VIPDHPCPRN SCSSGSELSL 250 260 270 280 290 300 SSTCSEYSSG SSYTWQDRKL NGKRQTSQIW DKRLSIDSSL PSGFTSPADE LPPTRIKESH 310 320 330 340 350 360 ILEGLRKLQK RKVLLESPAS VMSKWGYKDC MNSNEGIYSP GIKNSSLKEC PPCQSPGRGI 370 380 390 400 410 420 PCQNLHQTFN YDANSHEYAH EEFLSSASPR TSPSQGCRIQ SSKLTHSVSD SLFTWEPHRK 430 440 450 460 470 480 YFAEGTASVY TREMPERLTR CASHCPLERK LCPSVHLPWV QRDRDPHSQG PGHVPLNLQL 490 500 510 520 530 540 SDTDDNETLH ELHIESSDER SPSDLSLTGD TDRSMENLGV KFGKSECVSH DKGKEECPTH 550 560 570 580 590 600 LETSPKAFSF IKQQRVVKRT SSEECVTVIF DAENGEPVEF SSHQAGVVTV TRDEISISST 610 620 630 640 650 660 PAGPSEELTE LSPQGITHFQ PGATARDYPF LGRPEEEPKT NIPKDENGIL TAPNDSFNSP 670 680 690 700 710 720 TTVTQNSPRP KLVKPTQGVA WQSNSRSVAN MSVYTKQGLT KIPSRSKISP QKSKLVDPMP 730 740 750 760 770 780 TTLVPSSGLG TLAKTPASPT GKLSQCTNAE SPGTFCDVQP ESHIPKHPTQ LPHIPKISNK 790 800 810 820 830 840 KNWVQCPKSQ TAGIQSRHLM GKSDNGESPT RAKRCGSEPK TRMRSPSPPT PPGRSVSLLV 850 860 870 880 890 900 RPSYDYPPLP SPAKPETKAP GDTVSTGLKS PVLKGSSAPL VSSSPAMSEI QKKPSVASRK 910 920 930 940 950 960 SAFPTALPST QAVVHTRYPE HTSSSPFAVT APGPTKVSPK RGIPKAPHPQ ALGTTHMDTD 970 980 990 1000 1010 1020 LQTPKTRPSS YELLEMTSCK NLSPGRKGQL SDSTVTPHRP SFSGPNEFLT PQVNSTSSSS 1030 1040 1050 1060 1070 1080 SSCRNQGTSQ GGQNPPEKGP KTRLPVGLRV LMKSPQLLRK TSMVPGKQEK DSLNEASRSS 1090 1100 1110 1120 1130 1140 VTANKSNPED SKDPASLETS RDERTTALLG LRGPESLARG LGLESTPPES LESSISRDDG 1150 1160 1170 1180 1190 1200 RDGVDSRAIK RSFSSSKPHL KPALGMNGAK ARSQSFSFHL GEKPSTPPIE GPGKIRTQII 1210 1220 1230 1240 1250 1260 TNTAERGNSL TRQNISMEGS PSKTPSVSTP DNLPNAGRPL GNPFSRQGSL CSTGSSSSQH 1270 1280 1290 1300 1310 1320 GSPSKLPLRM LTRPEGLLTP EEEDQRFSTQ EECPGRGVHE QSSSNHHRHP SSTLSDCPQS 1330 1340 1350 1360 1370 1380 LQVPGRIQRP SNLETNGISK LETSGRHPDA SPTGTSVVSP EAPLSPSIEE KVMLCIQENV 1390 1400 1410 1420 1430 1440 EKGQAQTKSA SVEVKPRAGP SFTSWFGFRK SRLPALSSRR MEASKSKVEK KDTKLKSERK 1450 1460 1470 1480 1490 1500 KEKKKAEVQS KRENELSRGT KKADGQSPDD GLQNTESLKA TQDIYNQMKS EPRNRPSPAV 1510 1520 1530 1540 1550 1560 SPTKDAFMTE LLNRVDKRAA LQTESGSKGV SCRSVLEGTS QGSCFASGSV STQGSQKKNI 1570 1580 1590 1600 1610 1620 KTKVDMEKPR ESLGAEVDED VREDEEDRVA DAALQSHVIE SNCQMRTLDS GIGTFPLPDS 1630 1640 1650 1660 1670 1680 GNRSMGRYIC QQDSPEDTDP LLPLQPAPSM PSSARAQTLD REVPSSTDSQ SSSESTIIHS 1690 1700 1710 1720 1730 1740 VSDPSMMARG IRASQSHLPK PTTSGKTSFE KQNGAESKAT TGPSFEYAED AVPSEPLSGW 1750 1760 1770 1780 1790 1800 RGEDATTENQ ELKQVEETKE DPENRLSEIS LESFNKFNSN TVILLEKEQS PSEVEGQKEE 1810 1820 1830 1840 KGKETEVSLS SSDRPGVDHV ESLSDSLYDS FSSCASQTSN A

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Genome sequence of the Brown Norway rat yields insights into mammalian evolution." Rat Genome Sequencing Project Consortium Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M. , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S. Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Brown Norway Ensembl ENSRNOP00000029665.
[2]	Ensembl Submitted (JUL-2011) to UniProtKB Cited for: IDENTIFICATION. Strain: Brown Norway Ensembl ENSRNOP00000029665.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AABR06074412 Genomic DNA. No translation available. AABR06074413 Genomic DNA. No translation available. AABR06074414 Genomic DNA. No translation available. AABR06074415 Genomic DNA. No translation available. AABR06074416 Genomic DNA. No translation available. AABR06074417 Genomic DNA. No translation available. AABR06074418 Genomic DNA. No translation available. AABR06074419 Genomic DNA. No translation available.
IPI	IPI00765462.
3D structure databases
ModBase	Search...
Proteomic databases
PRIDE	F1LU96.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSRNOT00000038020; ENSRNOP00000029665; ENSRNOG00000021553.
Organism-specific databases
RGD	1564507. Nckap5.
Phylogenomic databases
GeneTree	ENSGT00530000063607.
Family and domain databases
InterPro	IPR026163. Nckap5l. [Graphical view]
PANTHER	PTHR21740. PTHR21740. 1 hit.
ProtoNet	Search...
Other
NextBio	35577685.

Entry information

Entry name

F1LU96_RAT

Accession

Primary (citable) accession number: F1LU96

Entry history

Integrated into UniProtKB/TrEMBL:	May 3, 2011
Last sequence update:	April 3, 2013
Last modified:	May 1, 2013
This is version 14 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)