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F1LU96

- F1LU96_RAT

UniProt

F1LU96 - F1LU96_RAT

Protein
Submitted name:

Protein Nckap5

Gene

Nckap5

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 19 (01 Oct 2014)
      Sequence version 2 (03 Apr 2013)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein Nckap5Imported
    Gene namesi
    Name:Nckap5Imported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
    ProteomesiUP000002494: Chromosome 13

    Organism-specific databases

    RGDi1564507. Nckap5.

    PTM / Processingi

    Proteomic databases

    PRIDEiF1LU96.

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00530000063607.
    OMAiDSLFGWE.
    OrthoDBiEOG7PGDQM.
    TreeFamiTF331208.

    Family and domain databases

    InterProiIPR026163. Nckap5l.
    [Graphical view]
    PANTHERiPTHR21740. PTHR21740. 1 hit.

    Sequencei

    Sequence statusi: Fragment.

    F1LU96-1 [UniParc]FASTAAdd to Basket

    « Hide

    HEKLIHELEE ERQLRLQSEE RLREVTLESE RNRIQMLGLQ QQFSRMEETV     50
    RSLLQSQGSP EQKKEEPAKI TAYQERVSEE ERKEQAALGD LRVEADEDSR 100
    SEHSSTEGGK EDSRLLLKRL KALEAENSAL ALENENQREQ YERCLDEVAN 150
    QVVRALLTQK DLREECVKLK TRVFDLEQQN RALSILFQQR VRPASDVLLQ 200
    EHLQNAKSGA PALKHSGSGV VIPDHPCPRN SCSSGSELSL SSTCSEYSSG 250
    SSYTWQDRKL NGKRQTSQIW DKRLSIDSSL PSGFTSPADE LPPTRIKESH 300
    ILEGLRKLQK RKVLLESPAS VMSKWGYKDC MNSNEGIYSP GIKNSSLKEC 350
    PPCQSPGRGI PCQNLHQTFN YDANSHEYAH EEFLSSASPR TSPSQGCRIQ 400
    SSKLTHSVSD SLFTWEPHRK YFAEGTASVY TREMPERLTR CASHCPLERK 450
    LCPSVHLPWV QRDRDPHSQG PGHVPLNLQL SDTDDNETLH ELHIESSDER 500
    SPSDLSLTGD TDRSMENLGV KFGKSECVSH DKGKEECPTH LETSPKAFSF 550
    IKQQRVVKRT SSEECVTVIF DAENGEPVEF SSHQAGVVTV TRDEISISST 600
    PAGPSEELTE LSPQGITHFQ PGATARDYPF LGRPEEEPKT NIPKDENGIL 650
    TAPNDSFNSP TTVTQNSPRP KLVKPTQGVA WQSNSRSVAN MSVYTKQGLT 700
    KIPSRSKISP QKSKLVDPMP TTLVPSSGLG TLAKTPASPT GKLSQCTNAE 750
    SPGTFCDVQP ESHIPKHPTQ LPHIPKISNK KNWVQCPKSQ TAGIQSRHLM 800
    GKSDNGESPT RAKRCGSEPK TRMRSPSPPT PPGRSVSLLV RPSYDYPPLP 850
    SPAKPETKAP GDTVSTGLKS PVLKGSSAPL VSSSPAMSEI QKKPSVASRK 900
    SAFPTALPST QAVVHTRYPE HTSSSPFAVT APGPTKVSPK RGIPKAPHPQ 950
    ALGTTHMDTD LQTPKTRPSS YELLEMTSCK NLSPGRKGQL SDSTVTPHRP 1000
    SFSGPNEFLT PQVNSTSSSS SSCRNQGTSQ GGQNPPEKGP KTRLPVGLRV 1050
    LMKSPQLLRK TSMVPGKQEK DSLNEASRSS VTANKSNPED SKDPASLETS 1100
    RDERTTALLG LRGPESLARG LGLESTPPES LESSISRDDG RDGVDSRAIK 1150
    RSFSSSKPHL KPALGMNGAK ARSQSFSFHL GEKPSTPPIE GPGKIRTQII 1200
    TNTAERGNSL TRQNISMEGS PSKTPSVSTP DNLPNAGRPL GNPFSRQGSL 1250
    CSTGSSSSQH GSPSKLPLRM LTRPEGLLTP EEEDQRFSTQ EECPGRGVHE 1300
    QSSSNHHRHP SSTLSDCPQS LQVPGRIQRP SNLETNGISK LETSGRHPDA 1350
    SPTGTSVVSP EAPLSPSIEE KVMLCIQENV EKGQAQTKSA SVEVKPRAGP 1400
    SFTSWFGFRK SRLPALSSRR MEASKSKVEK KDTKLKSERK KEKKKAEVQS 1450
    KRENELSRGT KKADGQSPDD GLQNTESLKA TQDIYNQMKS EPRNRPSPAV 1500
    SPTKDAFMTE LLNRVDKRAA LQTESGSKGV SCRSVLEGTS QGSCFASGSV 1550
    STQGSQKKNI KTKVDMEKPR ESLGAEVDED VREDEEDRVA DAALQSHVIE 1600
    SNCQMRTLDS GIGTFPLPDS GNRSMGRYIC QQDSPEDTDP LLPLQPAPSM 1650
    PSSARAQTLD REVPSSTDSQ SSSESTIIHS VSDPSMMARG IRASQSHLPK 1700
    PTTSGKTSFE KQNGAESKAT TGPSFEYAED AVPSEPLSGW RGEDATTENQ 1750
    ELKQVEETKE DPENRLSEIS LESFNKFNSN TVILLEKEQS PSEVEGQKEE 1800
    KGKETEVSLS SSDRPGVDHV ESLSDSLYDS FSSCASQTSN A 1841
    Length:1,841
    Mass (Da):201,179
    Last modified:April 3, 2013 - v2
    Checksum:iF0DABAA5AB262B2E
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06074412 Genomic DNA. No translation available.
    AABR06074413 Genomic DNA. No translation available.
    AABR06074414 Genomic DNA. No translation available.
    AABR06074415 Genomic DNA. No translation available.
    AABR06074416 Genomic DNA. No translation available.
    AABR06074417 Genomic DNA. No translation available.
    AABR06074418 Genomic DNA. No translation available.
    AABR06074419 Genomic DNA. No translation available.

    Genome annotation databases

    EnsembliENSRNOT00000038020; ENSRNOP00000029665; ENSRNOG00000021553.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06074412 Genomic DNA. No translation available.
    AABR06074413 Genomic DNA. No translation available.
    AABR06074414 Genomic DNA. No translation available.
    AABR06074415 Genomic DNA. No translation available.
    AABR06074416 Genomic DNA. No translation available.
    AABR06074417 Genomic DNA. No translation available.
    AABR06074418 Genomic DNA. No translation available.
    AABR06074419 Genomic DNA. No translation available.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi F1LU96.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSRNOT00000038020 ; ENSRNOP00000029665 ; ENSRNOG00000021553 .

    Organism-specific databases

    RGDi 1564507. Nckap5.

    Phylogenomic databases

    GeneTreei ENSGT00530000063607.
    OMAi DSLFGWE.
    OrthoDBi EOG7PGDQM.
    TreeFami TF331208.

    Miscellaneous databases

    NextBioi 35577685.

    Family and domain databases

    InterProi IPR026163. Nckap5l.
    [Graphical view ]
    PANTHERi PTHR21740. PTHR21740. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
      Rat Genome Sequencing Project Consortium
      Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
      , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
      Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Brown NorwayImported.
    2. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: Brown NorwayImported.

    Entry informationi

    Entry nameiF1LU96_RAT
    AccessioniPrimary (citable) accession number: F1LU96
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 3, 2011
    Last sequence update: April 3, 2013
    Last modified: October 1, 2014
    This is version 19 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3