Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

F1LU96

- F1LU96_RAT

UniProt

F1LU96 - F1LU96_RAT

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

Protein Nckap5

Gene

Nckap5

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Nckap5Imported
Gene namesi
Name:Nckap5Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 13

Organism-specific databases

RGDi1564507. Nckap5.

PTM / Processingi

Proteomic databases

PRIDEiF1LU96.

Expressioni

Gene expression databases

ExpressionAtlasiF1LU96. baseline.

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00530000063607.
InParanoidiF1LU96.
OMAiDSLFGWE.
OrthoDBiEOG7PGDQM.
TreeFamiTF331208.

Family and domain databases

InterProiIPR026163. Nckap5l.
[Graphical view]
PANTHERiPTHR21740. PTHR21740. 1 hit.

Sequencei

Sequence statusi: Fragment.

F1LU96-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
HEKLIHELEE ERQLRLQSEE RLREVTLESE RNRIQMLGLQ QQFSRMEETV
60 70 80 90 100
RSLLQSQGSP EQKKEEPAKI TAYQERVSEE ERKEQAALGD LRVEADEDSR
110 120 130 140 150
SEHSSTEGGK EDSRLLLKRL KALEAENSAL ALENENQREQ YERCLDEVAN
160 170 180 190 200
QVVRALLTQK DLREECVKLK TRVFDLEQQN RALSILFQQR VRPASDVLLQ
210 220 230 240 250
EHLQNAKSGA PALKHSGSGV VIPDHPCPRN SCSSGSELSL SSTCSEYSSG
260 270 280 290 300
SSYTWQDRKL NGKRQTSQIW DKRLSIDSSL PSGFTSPADE LPPTRIKESH
310 320 330 340 350
ILEGLRKLQK RKVLLESPAS VMSKWGYKDC MNSNEGIYSP GIKNSSLKEC
360 370 380 390 400
PPCQSPGRGI PCQNLHQTFN YDANSHEYAH EEFLSSASPR TSPSQGCRIQ
410 420 430 440 450
SSKLTHSVSD SLFTWEPHRK YFAEGTASVY TREMPERLTR CASHCPLERK
460 470 480 490 500
LCPSVHLPWV QRDRDPHSQG PGHVPLNLQL SDTDDNETLH ELHIESSDER
510 520 530 540 550
SPSDLSLTGD TDRSMENLGV KFGKSECVSH DKGKEECPTH LETSPKAFSF
560 570 580 590 600
IKQQRVVKRT SSEECVTVIF DAENGEPVEF SSHQAGVVTV TRDEISISST
610 620 630 640 650
PAGPSEELTE LSPQGITHFQ PGATARDYPF LGRPEEEPKT NIPKDENGIL
660 670 680 690 700
TAPNDSFNSP TTVTQNSPRP KLVKPTQGVA WQSNSRSVAN MSVYTKQGLT
710 720 730 740 750
KIPSRSKISP QKSKLVDPMP TTLVPSSGLG TLAKTPASPT GKLSQCTNAE
760 770 780 790 800
SPGTFCDVQP ESHIPKHPTQ LPHIPKISNK KNWVQCPKSQ TAGIQSRHLM
810 820 830 840 850
GKSDNGESPT RAKRCGSEPK TRMRSPSPPT PPGRSVSLLV RPSYDYPPLP
860 870 880 890 900
SPAKPETKAP GDTVSTGLKS PVLKGSSAPL VSSSPAMSEI QKKPSVASRK
910 920 930 940 950
SAFPTALPST QAVVHTRYPE HTSSSPFAVT APGPTKVSPK RGIPKAPHPQ
960 970 980 990 1000
ALGTTHMDTD LQTPKTRPSS YELLEMTSCK NLSPGRKGQL SDSTVTPHRP
1010 1020 1030 1040 1050
SFSGPNEFLT PQVNSTSSSS SSCRNQGTSQ GGQNPPEKGP KTRLPVGLRV
1060 1070 1080 1090 1100
LMKSPQLLRK TSMVPGKQEK DSLNEASRSS VTANKSNPED SKDPASLETS
1110 1120 1130 1140 1150
RDERTTALLG LRGPESLARG LGLESTPPES LESSISRDDG RDGVDSRAIK
1160 1170 1180 1190 1200
RSFSSSKPHL KPALGMNGAK ARSQSFSFHL GEKPSTPPIE GPGKIRTQII
1210 1220 1230 1240 1250
TNTAERGNSL TRQNISMEGS PSKTPSVSTP DNLPNAGRPL GNPFSRQGSL
1260 1270 1280 1290 1300
CSTGSSSSQH GSPSKLPLRM LTRPEGLLTP EEEDQRFSTQ EECPGRGVHE
1310 1320 1330 1340 1350
QSSSNHHRHP SSTLSDCPQS LQVPGRIQRP SNLETNGISK LETSGRHPDA
1360 1370 1380 1390 1400
SPTGTSVVSP EAPLSPSIEE KVMLCIQENV EKGQAQTKSA SVEVKPRAGP
1410 1420 1430 1440 1450
SFTSWFGFRK SRLPALSSRR MEASKSKVEK KDTKLKSERK KEKKKAEVQS
1460 1470 1480 1490 1500
KRENELSRGT KKADGQSPDD GLQNTESLKA TQDIYNQMKS EPRNRPSPAV
1510 1520 1530 1540 1550
SPTKDAFMTE LLNRVDKRAA LQTESGSKGV SCRSVLEGTS QGSCFASGSV
1560 1570 1580 1590 1600
STQGSQKKNI KTKVDMEKPR ESLGAEVDED VREDEEDRVA DAALQSHVIE
1610 1620 1630 1640 1650
SNCQMRTLDS GIGTFPLPDS GNRSMGRYIC QQDSPEDTDP LLPLQPAPSM
1660 1670 1680 1690 1700
PSSARAQTLD REVPSSTDSQ SSSESTIIHS VSDPSMMARG IRASQSHLPK
1710 1720 1730 1740 1750
PTTSGKTSFE KQNGAESKAT TGPSFEYAED AVPSEPLSGW RGEDATTENQ
1760 1770 1780 1790 1800
ELKQVEETKE DPENRLSEIS LESFNKFNSN TVILLEKEQS PSEVEGQKEE
1810 1820 1830 1840
KGKETEVSLS SSDRPGVDHV ESLSDSLYDS FSSCASQTSN A
Length:1,841
Mass (Da):201,179
Last modified:April 3, 2013 - v2
Checksum:iF0DABAA5AB262B2E
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06074412 Genomic DNA. No translation available.
AABR06074413 Genomic DNA. No translation available.
AABR06074414 Genomic DNA. No translation available.
AABR06074415 Genomic DNA. No translation available.
AABR06074416 Genomic DNA. No translation available.
AABR06074417 Genomic DNA. No translation available.
AABR06074418 Genomic DNA. No translation available.
AABR06074419 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSRNOT00000038020; ENSRNOP00000029665; ENSRNOG00000021553.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06074412 Genomic DNA. No translation available.
AABR06074413 Genomic DNA. No translation available.
AABR06074414 Genomic DNA. No translation available.
AABR06074415 Genomic DNA. No translation available.
AABR06074416 Genomic DNA. No translation available.
AABR06074417 Genomic DNA. No translation available.
AABR06074418 Genomic DNA. No translation available.
AABR06074419 Genomic DNA. No translation available.

3D structure databases

ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi F1LU96.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000038020 ; ENSRNOP00000029665 ; ENSRNOG00000021553 .

Organism-specific databases

RGDi 1564507. Nckap5.

Phylogenomic databases

GeneTreei ENSGT00530000063607.
InParanoidi F1LU96.
OMAi DSLFGWE.
OrthoDBi EOG7PGDQM.
TreeFami TF331208.

Miscellaneous databases

NextBioi 35577685.

Gene expression databases

ExpressionAtlasi F1LU96. baseline.

Family and domain databases

InterProi IPR026163. Nckap5l.
[Graphical view ]
PANTHERi PTHR21740. PTHR21740. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  2. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.

Entry informationi

Entry nameiF1LU96_RAT
AccessioniPrimary (citable) accession number: F1LU96
Entry historyi
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: April 3, 2013
Last modified: October 29, 2014
This is version 20 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3