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Protein
Submitted name:

Protein Mbip

Gene

Mbip

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

ReactomeiREACT_336113. HATs acetylate histones.

Names & Taxonomyi

Protein namesi
Submitted name:
Protein MbipImported
Gene namesi
Name:MbipImported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494 Componenti: Chromosome 6

Organism-specific databases

RGDi1306310. Mbip.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Expressioni

Gene expression databases

ExpressionAtlasiF1LRS1. baseline.
GenevisibleiF1LRS1. RN.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000011419.

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00510000047831.
InParanoidiF1LRS1.
OMAiVKITIDW.
OrthoDBiEOG77M8P4.
TreeFamiTF331763.

Family and domain databases

InterProiIPR026062. MBIP.
[Graphical view]
PANTHERiPTHR23404:SF3. PTHR23404:SF3. 1 hit.

Sequencei

Sequence statusi: Complete.

F1LRS1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAATAEHSSS SSCEKNLERS SSPLLTREVL CEVFRSLHTL TGQLNLRDDV
60 70 80 90 100
VKITIDWNRL QSLSTSQPAL LLTALEQHVL YLQPFLAKLQ SLIKENSTAA
110 120 130 140 150
ELRQTEAETK SELRAKLPTG DLQDEGKLKD DDLGDVKKTQ IHFDPEVVQI
160 170 180 190 200
KAGKAEIDRR ISAFIERKQA EINENNVREF CNVIDCNQEN SCARTDAVFT
210 220 230 240 250
PYPGFKSHVK VSRVVNTYGP QTRPEGIAGS GHKPTGMLRD CGNQAVEERL
260 270 280 290 300
QNIEAHLRLQ TGGPVPRDIY QRIKKLEDKI LELEGISPEY FQSVNFSGKR
310 320 330 340
RKVQPPQNYS LAELDEKISA LKRALLRKSR EADSMASHHL P
Length:341
Mass (Da):38,336
Last modified:May 3, 2011 - v1
Checksum:i21108D74840CE5AF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR06044162 Genomic DNA. No translation available.
RefSeqiNP_001102182.2. NM_001108712.2.
UniGeneiRn.24202.

Genome annotation databases

EnsembliENSRNOT00000011419; ENSRNOP00000011419; ENSRNOG00000008610.
GeneIDi362740.
KEGGirno:362740.
UCSCiRGD:1306310. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR06044162 Genomic DNA. No translation available.
RefSeqiNP_001102182.2. NM_001108712.2.
UniGeneiRn.24202.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000011419.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000011419; ENSRNOP00000011419; ENSRNOG00000008610.
GeneIDi362740.
KEGGirno:362740.
UCSCiRGD:1306310. rat.

Organism-specific databases

CTDi51562.
RGDi1306310. Mbip.

Phylogenomic databases

GeneTreeiENSGT00510000047831.
InParanoidiF1LRS1.
OMAiVKITIDW.
OrthoDBiEOG77M8P4.
TreeFamiTF331763.

Enzyme and pathway databases

ReactomeiREACT_336113. HATs acetylate histones.

Miscellaneous databases

NextBioi681079.

Gene expression databases

ExpressionAtlasiF1LRS1. baseline.
GenevisibleiF1LRS1. RN.

Family and domain databases

InterProiIPR026062. MBIP.
[Graphical view]
PANTHERiPTHR23404:SF3. PTHR23404:SF3. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  2. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.

Entry informationi

Entry nameiF1LRS1_RAT
AccessioniPrimary (citable) accession number: F1LRS1
Entry historyi
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: June 24, 2015
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.