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F1LRS1

- F1LRS1_RAT

UniProt

F1LRS1 - F1LRS1_RAT

Protein
Submitted name:

Protein Mbip

Gene

Mbip

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 23 (01 Oct 2014)
      Sequence version 1 (03 May 2011)
      Previous versions | rss
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    Functioni

    GO - Biological processi

    1. histone H3 acetylation Source: Ensembl

    Enzyme and pathway databases

    ReactomeiREACT_198384. HATs acetylate histones.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein MbipImported
    Gene namesi
    Name:MbipImported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
    ProteomesiUP000002494: Chromosome 6

    Organism-specific databases

    RGDi1306310. Mbip.

    Subcellular locationi

    GO - Cellular componenti

    1. Ada2/Gcn5/Ada3 transcription activator complex Source: Ensembl
    2. cytoplasm Source: Ensembl
    3. nucleolus Source: Ensembl

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00510000047831.
    OMAiVKITIDW.
    OrthoDBiEOG77M8P4.
    TreeFamiTF331763.

    Family and domain databases

    InterProiIPR026062. MBIP.
    [Graphical view]
    PANTHERiPTHR23404:SF3. PTHR23404:SF3. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    F1LRS1-1 [UniParc]FASTAAdd to Basket

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    MAATAEHSSS SSCEKNLERS SSPLLTREVL CEVFRSLHTL TGQLNLRDDV    50
    VKITIDWNRL QSLSTSQPAL LLTALEQHVL YLQPFLAKLQ SLIKENSTAA 100
    ELRQTEAETK SELRAKLPTG DLQDEGKLKD DDLGDVKKTQ IHFDPEVVQI 150
    KAGKAEIDRR ISAFIERKQA EINENNVREF CNVIDCNQEN SCARTDAVFT 200
    PYPGFKSHVK VSRVVNTYGP QTRPEGIAGS GHKPTGMLRD CGNQAVEERL 250
    QNIEAHLRLQ TGGPVPRDIY QRIKKLEDKI LELEGISPEY FQSVNFSGKR 300
    RKVQPPQNYS LAELDEKISA LKRALLRKSR EADSMASHHL P 341
    Length:341
    Mass (Da):38,336
    Last modified:May 3, 2011 - v1
    Checksum:i21108D74840CE5AF
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06044162 Genomic DNA. No translation available.
    RefSeqiNP_001102182.2. NM_001108712.2.
    UniGeneiRn.24202.

    Genome annotation databases

    EnsembliENSRNOT00000011419; ENSRNOP00000011419; ENSRNOG00000008610.
    GeneIDi362740.
    KEGGirno:362740.
    UCSCiRGD:1306310. rat.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06044162 Genomic DNA. No translation available.
    RefSeqi NP_001102182.2. NM_001108712.2.
    UniGenei Rn.24202.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSRNOT00000011419 ; ENSRNOP00000011419 ; ENSRNOG00000008610 .
    GeneIDi 362740.
    KEGGi rno:362740.
    UCSCi RGD:1306310. rat.

    Organism-specific databases

    CTDi 51562.
    RGDi 1306310. Mbip.

    Phylogenomic databases

    GeneTreei ENSGT00510000047831.
    OMAi VKITIDW.
    OrthoDBi EOG77M8P4.
    TreeFami TF331763.

    Enzyme and pathway databases

    Reactomei REACT_198384. HATs acetylate histones.

    Miscellaneous databases

    NextBioi 681079.

    Family and domain databases

    InterProi IPR026062. MBIP.
    [Graphical view ]
    PANTHERi PTHR23404:SF3. PTHR23404:SF3. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
      Rat Genome Sequencing Project Consortium
      Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
      , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
      Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Brown NorwayImported.
    2. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: Brown NorwayImported.

    Entry informationi

    Entry nameiF1LRS1_RAT
    AccessioniPrimary (citable) accession number: F1LRS1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 3, 2011
    Last sequence update: May 3, 2011
    Last modified: October 1, 2014
    This is version 23 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3