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F1LRS1

- F1LRS1_RAT

UniProt

F1LRS1 - F1LRS1_RAT

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Protein
Submitted name:

Protein Mbip

Gene

Mbip

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Biological processi

  1. histone H3 acetylation Source: Ensembl
Complete GO annotation...

Enzyme and pathway databases

ReactomeiREACT_198384. HATs acetylate histones.

Names & Taxonomyi

Protein namesi
Submitted name:
Protein MbipImported
Gene namesi
Name:MbipImported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 6

Organism-specific databases

RGDi1306310. Mbip.

Subcellular locationi

GO - Cellular componenti

  1. Ada2/Gcn5/Ada3 transcription activator complex Source: Ensembl
  2. cytoplasm Source: Ensembl
  3. nucleolus Source: Ensembl
Complete GO annotation...

Expressioni

Gene expression databases

ExpressionAtlasiF1LRS1. baseline.

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00510000047831.
InParanoidiF1LRS1.
OMAiVKITIDW.
OrthoDBiEOG77M8P4.
TreeFamiTF331763.

Family and domain databases

InterProiIPR026062. MBIP.
[Graphical view]
PANTHERiPTHR23404:SF3. PTHR23404:SF3. 1 hit.

Sequencei

Sequence statusi: Complete.

F1LRS1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAATAEHSSS SSCEKNLERS SSPLLTREVL CEVFRSLHTL TGQLNLRDDV
60 70 80 90 100
VKITIDWNRL QSLSTSQPAL LLTALEQHVL YLQPFLAKLQ SLIKENSTAA
110 120 130 140 150
ELRQTEAETK SELRAKLPTG DLQDEGKLKD DDLGDVKKTQ IHFDPEVVQI
160 170 180 190 200
KAGKAEIDRR ISAFIERKQA EINENNVREF CNVIDCNQEN SCARTDAVFT
210 220 230 240 250
PYPGFKSHVK VSRVVNTYGP QTRPEGIAGS GHKPTGMLRD CGNQAVEERL
260 270 280 290 300
QNIEAHLRLQ TGGPVPRDIY QRIKKLEDKI LELEGISPEY FQSVNFSGKR
310 320 330 340
RKVQPPQNYS LAELDEKISA LKRALLRKSR EADSMASHHL P
Length:341
Mass (Da):38,336
Last modified:May 3, 2011 - v1
Checksum:i21108D74840CE5AF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR06044162 Genomic DNA. No translation available.
RefSeqiNP_001102182.2. NM_001108712.2.
UniGeneiRn.24202.

Genome annotation databases

EnsembliENSRNOT00000011419; ENSRNOP00000011419; ENSRNOG00000008610.
GeneIDi362740.
KEGGirno:362740.
UCSCiRGD:1306310. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR06044162 Genomic DNA. No translation available.
RefSeqi NP_001102182.2. NM_001108712.2.
UniGenei Rn.24202.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000011419 ; ENSRNOP00000011419 ; ENSRNOG00000008610 .
GeneIDi 362740.
KEGGi rno:362740.
UCSCi RGD:1306310. rat.

Organism-specific databases

CTDi 51562.
RGDi 1306310. Mbip.

Phylogenomic databases

GeneTreei ENSGT00510000047831.
InParanoidi F1LRS1.
OMAi VKITIDW.
OrthoDBi EOG77M8P4.
TreeFami TF331763.

Enzyme and pathway databases

Reactomei REACT_198384. HATs acetylate histones.

Miscellaneous databases

NextBioi 681079.

Gene expression databases

ExpressionAtlasi F1LRS1. baseline.

Family and domain databases

InterProi IPR026062. MBIP.
[Graphical view ]
PANTHERi PTHR23404:SF3. PTHR23404:SF3. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  2. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.

Entry informationi

Entry nameiF1LRS1_RAT
AccessioniPrimary (citable) accession number: F1LRS1
Entry historyi
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: October 29, 2014
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3