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Protein
Submitted name:

Prominin-2

Gene

Prom2

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Prominin-2Imported
Gene namesi
Name:Prom2Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 3

Organism-specific databases

RGDi621435 Prom2

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei104 – 132HelicalSequence analysisAdd BLAST29
Transmembranei153 – 175HelicalSequence analysisAdd BLAST23
Transmembranei426 – 452HelicalSequence analysisAdd BLAST27
Transmembranei473 – 498HelicalSequence analysisAdd BLAST26

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 27Sequence analysisAdd BLAST27
ChainiPRO_500326704528 – 885Sequence analysisAdd BLAST858

Expressioni

Gene expression databases

BgeeiENSRNOG00000014710

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili639 – 668Sequence analysisAdd BLAST30

Keywords - Domaini

Coiled coilSequence analysis, SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG4331 Eukaryota
ENOG410XRG0 LUCA
GeneTreeiENSGT00530000063586
OMAiNDSYDLE
OrthoDBiEOG091G07PX
TreeFamiTF324631

Family and domain databases

InterProiView protein in InterPro
IPR008795 Prominin
PANTHERiPTHR22730 PTHR22730, 1 hit
PfamiView protein in Pfam
PF05478 Prominin, 1 hit

Sequencei

Sequence statusi: Complete.

F1LQW5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTRTLDLMVP LLGLSLGLAL SLPRAVAADC GSLGRVEHLA FAPVPGTEPT
60 70 80 90 100
APRVRAPWPL DSLYGTVRRF LSVVQLNPFP AELIKTLLND PSSVKTDEVV
110 120 130 140 150
RYEAGYVVCA VIAGLYLLLV PITGLCFCCC RCRRRCGGRV KTEHKAMACE
160 170 180 190 200
RGTLMTFLLL TTLMLLIGMV CAFATNQFTH SQTGPSVEAV PETLLSLRGL
210 220 230 240 250
VSDVPKKLQA VADQFSLPQK QVSKDLDGVG ENLGNIIHNQ LKSTVYPVLA
260 270 280 290 300
SVHGLGQALQ VSIDHLQSVN ATSVELREGQ QHLGPPVQAH RERLLALLQE
310 320 330 340 350
SWCHENCKGA LSQASALQLG ADFSQMPPVD DVLHRLQGVP EANFSSMVQE
360 370 380 390 400
ENATFNNLPI LVHMQMVSVV KDLKKALAEQ PEGVRMLAQA FPGSEATSRW
410 420 430 440 450
SQALEGLEQR SRPYLQDVQR YETYRWILGC VLCSAILLVV ICNLLGLSLG
460 470 480 490 500
IWGLFAREDP SHSETKGEAG ARFLMAGVAF SFLFAAPLIL LVFATFLVGG
510 520 530 540 550
NVQTLVCRSW ESGELYEFVD TPGNLPPSMN LSYLLGLRKN ISVFQAYRQC
560 570 580 590 600
KAGTALWKVL QLNDSYDLDK HLDIKQYTHK LQQELQSFKV DLKDLDLLNP
610 620 630 640 650
AARQNLEALQ SSGLEKIHYR DFLVQIQKPV VKTDMGQLAK ELEGLAQAHN
660 670 680 690 700
ESLRRQQLQE EARELRSLYQ EKVVPQENLV AKLNPSIRVL ESSAPKLQVN
710 720 730 740 750
TSDLLDIVAR LKGELPAQLN HILRNATECF LTREMGYFSQ YVTWVREEVT
760 770 780 790 800
QHIATCQPFS KALDDGHMIL CDMGQPLECL LVLPGLVHLL PHPQHHLRGQ
810 820 830 840 850
DLQVLPSHPE TAQLHQLRRD TALPYPQGHL PEAIEPTGQG DTWGFPVLLP
860 870 880
CLSLDQTTSV TSVPEPRLAS SAGLSPVPHL YSFCS
Length:885
Mass (Da):97,817
Last modified:April 3, 2013 - v2
Checksum:iA094B147FF2D747A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07053681 Genomic DNA No translation available.

Genome annotation databases

EnsembliENSRNOT00000020354; ENSRNOP00000020354; ENSRNOG00000014710

Similar proteinsi

Entry informationi

Entry nameiF1LQW5_RAT
AccessioniPrimary (citable) accession number: F1LQW5
Entry historyiIntegrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: April 3, 2013
Last modified: March 28, 2018
This is version 41 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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