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F1LP76 (F1LP76_RAT) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein, isoform CRA_a EMBL EDL91690.1
Gene names
Name:Ikbkap EMBL EDL91690.1 RGD 620072 Ensembl ENSRNOP00000022836
ORF Names:rCG_31928 EMBL EDL91690.1
OrganismRattus norvegicus (Rat) [Reference proteome] Ensembl ENSRNOP00000022836
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Protein attributes

Sequence length1331 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
F1LP76 [UniParc].

Last modified April 3, 2013. Version 2.
Checksum: FEA210441C537C69

FASTA1,331149,199
        10         20         30         40         50         60 
MRNLKLHQTL EFRDIQAPGK PQCFCLRAEQ GTVLIGSERG LTEVDPVKKE VKTEISLVAE 

        70         80         90        100        110        120 
GFLPEDGSGC IVGIQDLLDQ ESVCVATASG DVIVCNVSTQ QLECVGNVAS GISVMSWSPD 

       130        140        150        160        170        180 
QELLLLATAQ QTLIMMTRDY EVITEQQIHQ DDFGEGKFIT VGWGSKDTQF HGSEGRPITF 

       190        200        210        220        230        240 
PVQMHESALS WDDHRPQITW RGDGQFFAVS VVCSQTGARK IRVWNREFAL QSTSESVPGL 

       250        260        270        280        290        300 
GPSLAWKPSG SLIASTQDKP NQQDVVFFEK NGLLHGYFTL PFLKDEVKVN DLLWNADSSV 

       310        320        330        340        350        360 
LAVWLEDLPK EGSSTLKSYV QLWTVGNYHW YLKQSLPFST TGKNQIVSLL WDPVTPGRLH 

       370        380        390        400        410        420 
VLCQGWRYLC CDWHWTTDRS SGNSADDLAN VAVIDGNKVL VTVFQRTVTP PPMCTYRLLI 

       430        440        450        460        470        480 
PHPVNQVMFS AHLGNDLAVL DASNQISVYK CDDKPDMDST VKLGAVGGTG FKVPLRTPHL 

       490        500        510        520        530        540 
EKRYRIQFGN KEEEEDVSPL QFRFLTWIEG DAFLAISHSH SSPQSIIHHL TMAGSEGDEE 

       550        560        570        580        590        600 
QGQLNVSSSV TVDGVVIGLC CCSKTKSSAV QLADGQVLKY LWESPSSAVE PWKNSEGRPV 

       610        620        630        640        650        660 
RFARPCTQME AAAIGGEECV LGLTDRCRFF INDTEVASNI TSFAVCDDFL LVTTHSHTCQ 

       670        680        690        700        710        720 
CFSLSGASLK MLQAGLCGSQ VPSGEILRKV ERGSRIVTVV PQDTKLILQM PRGNLEVVHH 

       730        740        750        760        770        780 
RALVLAQIRK WLDKLMFKEA FECMRKLRIN LNLIHDHNPK VFLENVETFI KQIDSVNHLN 

       790        800        810        820        830        840 
LFFTELKEED VTKTMYPPPV TKSVQVSTNP DGKKVDLICD AMRVAMETIN PRKFCLSILT 

       850        860        870        880        890        900 
SHVKKTTPEL DIVLQKVHEL QGKIPFEPES VSAEEALKYL LLLVDVNELF NHSLGTYDFD 

       910        920        930        940        950        960 
LVLMVAEKSQ KDPKEYLPFL NTLKKMETNY QRFTIDKYLK RYEKALGHLS KCGPEYFTEC 

       970        980        990       1000       1010       1020 
LNLIKDKNLY KEALKLYRPD SPQYQAVSVA YGEHLVQEHL YEPAGLVFAR CGAHEKALEA 

      1030       1040       1050       1060       1070       1080 
FLACGSWQQA LCMAAQLQMA KDKVAGLART LAGKLVEQRK HSEAATVLEQ YAQDYEEAVL 

      1090       1100       1110       1120       1130       1140 
LLLEGSAWEE ALRLVYKYDR VDIIETSVKP SILEAQKNYM DFLDSQTATF IRHKNRLKVV 

      1150       1160       1170       1180       1190       1200 
RELKSQAPRV HVDHEVAHGR ETDLFSETSS IRSGSEMSGR YSHSNSRISA RSSKNRRKAE 

      1210       1220       1230       1240       1250       1260 
RKKHSLKEGS PLEGLALLEA LSEVVQSIEK LKDEVHAILK VLFLFEFEEQ ARELQRAFES 

      1270       1280       1290       1300       1310       1320 
TLQLMGTALP DIWTLTGQQS SATPVLGPSS TVNSIMASYQ QQKTCVPVLD AWACLPPKID 

      1330 
QRSQWKLSLL E 

« Hide

References

« Hide 'large scale' references
[1]"Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
Rat Genome Sequencing Project Consortium
Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M. expand/collapse author list , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Brown Norway Ensembl ENSRNOP00000022836.
[2]"Gene and alternative splicing annotation with AIR."
Florea L., Di Francesco V., Miller J., Turner R., Yao A., Harris M., Walenz B., Mobarry C., Merkulov G.V., Charlab R., Dew I., Deng Z., Istrail S., Li P., Sutton G.
Genome Res. 15:54-66(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: BN EMBL EDL91690.1.
[3]Mural R.J., Li P.W., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S.H., Dew I., Evans C.A., Ferriera S., Flanigan M., Fosler C., Glodek A., Gu Z., Holt R.A., Jennings D., Kraft C.L., Lu F. expand/collapse author list , Nguyen T., Nusskern D.R., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Wang Z., Woodage T., Zheng X.H., Zhong F.
Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: BN EMBL EDL91690.1.
[4]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Brown Norway Ensembl ENSRNOP00000022836.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AABR06037256 Genomic DNA. No translation available.
CH474039 Genomic DNA. Translation: EDL91690.1.
UniGeneRn.162816.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSRNOT00000022836; ENSRNOP00000022836; ENSRNOG00000016725.

Organism-specific databases

RGD620072. Ikbkap.

Phylogenomic databases

GeneTreeENSGT00390000013344.
OMATREVKNE.
OrthoDBEOG7BCN9X.
TreeFamTF300402.

Family and domain databases

Gene3D2.120.10.30. 2 hits.
InterProIPR011042. 6-blade_b-propeller_TolB-like.
IPR006849. IKI3.
[Graphical view]
PANTHERPTHR12747. PTHR12747. 1 hit.
PfamPF04762. IKI3. 1 hit.
[Graphical view]
PIRSFPIRSF017233. IKAP. 1 hit.
ProtoNetSearch...

Other

NextBio35576041.
PROF1LP76.

Entry information

Entry nameF1LP76_RAT
AccessionPrimary (citable) accession number: F1LP76
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: April 3, 2013
Last modified: April 16, 2014
This is version 24 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)