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F1KZZ8

- F1KZZ8_ASCSU

UniProt

F1KZZ8 - F1KZZ8_ASCSU

Protein

Galectin

Gene
N/A
Organism
Ascaris suum (Pig roundworm) (Ascaris lumbricoides)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 16 (01 Oct 2014)
      Sequence version 1 (03 May 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. carbohydrate binding Source: InterPro

    Keywords - Ligandi

    LectinUniRule annotationSAAS annotationImported

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    GalectinUniRule annotation
    OrganismiAscaris suum (Pig roundworm) (Ascaris lumbricoides)Imported
    Taxonomic identifieri6253 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaAscarididaAscaridoideaAscarididaeAscaris

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4HL0X-ray2.00A/B1-278[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Contains 2 galectin domains.UniRule annotation

    Family and domain databases

    Gene3Di2.60.120.200. 2 hits.
    InterProiIPR008985. ConA-like_lec_gl_sf.
    IPR013320. ConA-like_subgrp.
    IPR001079. Galectin_CRD.
    [Graphical view]
    PfamiPF00337. Gal-bind_lectin. 2 hits.
    [Graphical view]
    SMARTiSM00908. Gal-bind_lectin. 2 hits.
    SM00276. GLECT. 2 hits.
    [Graphical view]
    SUPFAMiSSF49899. SSF49899. 2 hits.
    PROSITEiPS51304. GALECTIN. 2 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F1KZZ8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MATETSYPVP YRSKLTEPFE PGQTLIIKGK TAEDSVRFTI NLHNTSADFS    50
    GNDVPLHISV RFDEGKIVFN TFSKGEWGKE ERKSNPYKKG DDIDIRIRAH 100
    DSKFSISVDQ KEVKEYEHRV PLSSVTHFSV DGDILITYIH WGGKYYPVPY 150
    ESGLAGDGLA PGKSLLIFAT PEKKGKRFHI NLLKKNGDIA LHFNPRFDEK 200
    AIVRNSLISG EWGNEEREGK NPLEKGIGCD LEFRNEEYAF QIYVDGERFA 250
    TYAHRLDPHD INGLQIGGDV EVTGIQMV 278
    Length:278
    Mass (Da):31,422
    Last modified:May 3, 2011 - v1
    Checksum:i192A0ED78667A695
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    JI168813 mRNA. Translation: ADY43452.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    JI168813 mRNA. Translation: ADY43452.1 .

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4HL0 X-ray 2.00 A/B 1-278 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Family and domain databases

    Gene3Di 2.60.120.200. 2 hits.
    InterProi IPR008985. ConA-like_lec_gl_sf.
    IPR013320. ConA-like_subgrp.
    IPR001079. Galectin_CRD.
    [Graphical view ]
    Pfami PF00337. Gal-bind_lectin. 2 hits.
    [Graphical view ]
    SMARTi SM00908. Gal-bind_lectin. 2 hits.
    SM00276. GLECT. 2 hits.
    [Graphical view ]
    SUPFAMi SSF49899. SSF49899. 2 hits.
    PROSITEi PS51304. GALECTIN. 2 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles."
      Wang J., Czech B., Crunk A., Wallace A., Mitreva M., Hannon G.J., Davis R.E.
      Genome Res. 21:1462-1477(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
    2. "Structure of full-length Toxascaris leonina galectin with two carbohydrate-recognition domains."
      Jeong M.S., Hwang H.G., Yu H.S., Jang S.B.
      Acta Crystallogr. D 69:168-175(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS).

    Entry informationi

    Entry nameiF1KZZ8_ASCSU
    AccessioniPrimary (citable) accession number: F1KZZ8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 3, 2011
    Last sequence update: May 3, 2011
    Last modified: October 1, 2014
    This is version 16 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported

    External Data

    Dasty 3