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F0ZSY6

- F0ZSY6_DICPU

UniProt

F0ZSY6 - F0ZSY6_DICPU

Protein

DNA ligase

Gene

DICPUDRAFT_81260

Organism
Dictyostelium purpureum (Slime mold)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 14 (01 Oct 2014)
      Sequence version 1 (03 May 2011)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).UniRule annotation

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: UniProtKB-KW
    3. DNA replication Source: UniProtKB-KW

    Keywords - Molecular functioni

    LigaseUniRule annotation

    Keywords - Biological processi

    DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

    Keywords - Ligandi

    ATP-bindingUniRule annotation, Nucleotide-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
    Gene namesi
    ORF Names:DICPUDRAFT_81260Imported
    OrganismiDictyostelium purpureum (Slime mold)Imported
    Taxonomic identifieri5786 [NCBI]
    Taxonomic lineageiEukaryotaAmoebozoaMycetozoaDictyosteliidaDictyostelium
    ProteomesiUP000001064: Unassembled WGS sequence

    Family & Domainsi

    Sequence similaritiesi

    Phylogenomic databases

    KOiK10776.
    OMAiINTGAKF.

    Family and domain databases

    Gene3Di1.10.3260.10. 1 hit.
    2.40.50.140. 1 hit.
    3.40.50.10190. 2 hits.
    InterProiIPR001357. BRCT_dom.
    IPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF00533. BRCT. 1 hit.
    PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    PF12738. PTCB-BRCT. 1 hit.
    [Graphical view]
    SMARTiSM00292. BRCT. 2 hits.
    [Graphical view]
    SUPFAMiSSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    SSF52113. SSF52113. 2 hits.
    TIGRFAMsiTIGR00574. dnl1. 1 hit.
    PROSITEiPS50172. BRCT. 2 hits.
    PS00697. DNA_LIGASE_A1. 1 hit.
    PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F0ZSY6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSEDKSGSLY SLSKLCEKLK EESTHSGKTQ IISSFCKVFN GDLYLLAKLL     50
    LCKEDKRVFR MRDKVMLKIC AHIWDADLDD MIADLDNGDF TETCKKFYIE 100
    YGKYPEKSTL TLKQVDDFLD SLTLSGKFDE QVKIISSLLK KCTPQDFRLI 150
    CRIIDSDLKI NTGAKFFLDA LHPNAYDAYK KANNLHGVIE KIQKHSFESD 200
    EESDDERSSS SSSNKKKSKK SIDSDDSDNE KSSSKKKSKS KSKSFDVAIK 250
    LMTPIKPMLP KAVKDVDDVA KSSSCFYSEI KYDGERIQIH KDGNKFSCFS 300
    RNLKPLMPWK VDEVKQYIPK ATKANQMILD GEVLLMDTKT GIPLPFGTLG 350
    AHKKKGFIDA TVCVFLFDIL YLDGKSLIHL PLEERREILE KNVTVVKHRV 400
    EFSEVTIVKG IQEKYKLTNL LNRAFKEKLE GLVIKNADSI YEPGARHWIK 450
    VKKDYIKGMA DSADLIAIGG YYGSGSFGGL VTVFLMACYD KVSKRYKTVV 500
    KASGGLDDKT IDKLQPKIKE TMKKISKDHT KVPDWIDINK PYTPDFIVEH 550
    PRDAMILEIE SAELTKTNYH TSGYSMRFPR IVRFREDKDY KTATNLQELM 600
    ELGKDAKIIP TDDIEGEFDD ENLIAKRNKK KSLSITATTS TTTTTTTSSK 650
    SKDKDQQQSD NEEEDSKTKD KLFYVGGDLT QPFSGSGDTS PNIFVLNYVD 700
    NTDKWNNKGI SGAISKRFPK VVESFEKIKS GESKSEKVLE ENIDKEKKKI 750
    FVCNLSCIVP PKSKDESYSF SLKHFKSAIK ESKGVIKNKN GSVHIAKPSF 800
    SKPSWSEIEE VLIDELYDSG IKVFVHSIKS PPSVSKTSTL SSKTTTIDVS 850
    VNNNNNNNKN ENENEKTSLK RDRDQMLEHE ILKELEEKEL EAPVFGNVNV 900
    VFDQSVLDNQ KLAKKCERLI KILGGRVSEK WCAIKGLDKT THLICDDGES 950
    DLYHHVSRLG GAIAKTQWVE DCFNNDLLLP IDEIYCYVSK NGSSTSQNHS 1000
    SKSLDTNTTK NSNAMQIDKL GESTSTSKKE EKQCKSSPSP TKKQHLLNIF 1050
    SDCSIYLHEN VNDRDTLKRY IVAFGGDVVD QINEKTTHLI ASLPPNFSTV 1100
    KPKDLFKQFL QQNKTHNKKI GNSLWLWDSI NMGEVLDIKS YKLF 1144
    Length:1,144
    Mass (Da):129,457
    Last modified:May 3, 2011 - v1
    Checksum:i9E6CFEC950E9ECED
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL871165 Genomic DNA. Translation: EGC32964.1.
    RefSeqiXP_003290530.1. XM_003290482.1.

    Genome annotation databases

    GeneIDi10507925.
    KEGGidpp:DICPUDRAFT_81260.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL871165 Genomic DNA. Translation: EGC32964.1 .
    RefSeqi XP_003290530.1. XM_003290482.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 10507925.
    KEGGi dpp:DICPUDRAFT_81260.

    Phylogenomic databases

    KOi K10776.
    OMAi INTGAKF.

    Family and domain databases

    Gene3Di 1.10.3260.10. 1 hit.
    2.40.50.140. 1 hit.
    3.40.50.10190. 2 hits.
    InterProi IPR001357. BRCT_dom.
    IPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF00533. BRCT. 1 hit.
    PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    PF12738. PTCB-BRCT. 1 hit.
    [Graphical view ]
    SMARTi SM00292. BRCT. 2 hits.
    [Graphical view ]
    SUPFAMi SSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    SSF52113. SSF52113. 2 hits.
    TIGRFAMsi TIGR00574. dnl1. 1 hit.
    PROSITEi PS50172. BRCT. 2 hits.
    PS00697. DNA_LIGASE_A1. 1 hit.
    PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: QSDP1Imported.

    Entry informationi

    Entry nameiF0ZSY6_DICPU
    AccessioniPrimary (citable) accession number: F0ZSY6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 3, 2011
    Last sequence update: May 3, 2011
    Last modified: October 1, 2014
    This is version 14 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3