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F0ZSY6 (F0ZSY6_DICPU) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
DNA ligase RuleBase RU000617

EC=6.5.1.1 RuleBase RU000617
Gene names
ORF Names:DICPUDRAFT_81260 EMBL EGC32964.1
OrganismDictyostelium purpureum (Slime mold) [Reference proteome]
Taxonomic identifier5786 [NCBI]
Taxonomic lineageEukaryotaAmoebozoaMycetozoaDictyosteliidaDictyostelium

Protein attributes

Sequence length1144 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m). RuleBase RU000617

Sequence similarities

Belongs to the ATP-dependent DNA ligase family.

Sequences

Sequence LengthMass (Da)Tools
F0ZSY6 [UniParc].

Last modified May 3, 2011. Version 1.
Checksum: 9E6CFEC950E9ECED

FASTA1,144129,457
        10         20         30         40         50         60 
MSEDKSGSLY SLSKLCEKLK EESTHSGKTQ IISSFCKVFN GDLYLLAKLL LCKEDKRVFR 

        70         80         90        100        110        120 
MRDKVMLKIC AHIWDADLDD MIADLDNGDF TETCKKFYIE YGKYPEKSTL TLKQVDDFLD 

       130        140        150        160        170        180 
SLTLSGKFDE QVKIISSLLK KCTPQDFRLI CRIIDSDLKI NTGAKFFLDA LHPNAYDAYK 

       190        200        210        220        230        240 
KANNLHGVIE KIQKHSFESD EESDDERSSS SSSNKKKSKK SIDSDDSDNE KSSSKKKSKS 

       250        260        270        280        290        300 
KSKSFDVAIK LMTPIKPMLP KAVKDVDDVA KSSSCFYSEI KYDGERIQIH KDGNKFSCFS 

       310        320        330        340        350        360 
RNLKPLMPWK VDEVKQYIPK ATKANQMILD GEVLLMDTKT GIPLPFGTLG AHKKKGFIDA 

       370        380        390        400        410        420 
TVCVFLFDIL YLDGKSLIHL PLEERREILE KNVTVVKHRV EFSEVTIVKG IQEKYKLTNL 

       430        440        450        460        470        480 
LNRAFKEKLE GLVIKNADSI YEPGARHWIK VKKDYIKGMA DSADLIAIGG YYGSGSFGGL 

       490        500        510        520        530        540 
VTVFLMACYD KVSKRYKTVV KASGGLDDKT IDKLQPKIKE TMKKISKDHT KVPDWIDINK 

       550        560        570        580        590        600 
PYTPDFIVEH PRDAMILEIE SAELTKTNYH TSGYSMRFPR IVRFREDKDY KTATNLQELM 

       610        620        630        640        650        660 
ELGKDAKIIP TDDIEGEFDD ENLIAKRNKK KSLSITATTS TTTTTTTSSK SKDKDQQQSD 

       670        680        690        700        710        720 
NEEEDSKTKD KLFYVGGDLT QPFSGSGDTS PNIFVLNYVD NTDKWNNKGI SGAISKRFPK 

       730        740        750        760        770        780 
VVESFEKIKS GESKSEKVLE ENIDKEKKKI FVCNLSCIVP PKSKDESYSF SLKHFKSAIK 

       790        800        810        820        830        840 
ESKGVIKNKN GSVHIAKPSF SKPSWSEIEE VLIDELYDSG IKVFVHSIKS PPSVSKTSTL 

       850        860        870        880        890        900 
SSKTTTIDVS VNNNNNNNKN ENENEKTSLK RDRDQMLEHE ILKELEEKEL EAPVFGNVNV 

       910        920        930        940        950        960 
VFDQSVLDNQ KLAKKCERLI KILGGRVSEK WCAIKGLDKT THLICDDGES DLYHHVSRLG 

       970        980        990       1000       1010       1020 
GAIAKTQWVE DCFNNDLLLP IDEIYCYVSK NGSSTSQNHS SKSLDTNTTK NSNAMQIDKL 

      1030       1040       1050       1060       1070       1080 
GESTSTSKKE EKQCKSSPSP TKKQHLLNIF SDCSIYLHEN VNDRDTLKRY IVAFGGDVVD 

      1090       1100       1110       1120       1130       1140 
QINEKTTHLI ASLPPNFSTV KPKDLFKQFL QQNKTHNKKI GNSLWLWDSI NMGEVLDIKS 


YKLF 

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ
GL871165 Genomic DNA. Translation: EGC32964.1.
RefSeqXP_003290530.1. XM_003290482.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID10507925.
KEGGdpp:DICPUDRAFT_81260.

Phylogenomic databases

KOK10776.
OMAINTGAKF.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
3.40.50.10190. 2 hits.
InterProIPR001357. BRCT_dom.
IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF00533. BRCT. 1 hit.
PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
PF12738. PTCB-BRCT. 1 hit.
[Graphical view]
SMARTSM00292. BRCT. 2 hits.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 2 hits.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS50172. BRCT. 2 hits.
PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF0ZSY6_DICPU
AccessionPrimary (citable) accession number: F0ZSY6
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: October 16, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)