F0Z6K2 (F0Z6K2_DICPU) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein gadA EMBL EGC40506.1

Gene names

Name:	gadA EMBL EGC40506.1
ORF Names:	DICPUDRAFT_146669 EMBL EGC40506.1

Organism

Dictyostelium purpureum (Slime mold) [Reference proteome]

Taxonomic identifier

5786 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Amoebozoa › Mycetozoa › Dictyosteliida › Dictyostelium

Protein attributes

Sequence length	473 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	glutamate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F0Z6K2 [UniParc]. Last modified May 3, 2011. Version 1. Checksum: 149F8E5CB2943A56	FASTA	473	53,824
	10 20 30 40 50 60 MSLHSIKSEN TKEKKGNSNK YKRCYDLYAE KSATHPINKY KINDHPTDPD LSKNLILDEL 70 80 90 100 110 120 LLDGNAKQNL ATFCQTDVDI NIHTLMDKCI DKNMIDKDEY PQTAEIESRC VHMIADLWNS 130 140 150 160 170 180 PDSANTIGCS TTGSSEAAML GGLALKWKWR EQRKKEGKPC DRPNLITGPV QICWHKFVLY 190 200 210 220 230 240 FDIELREIPM ENGRLLMSPE EVLKRCDENT IGVVPTLGVT FTLQYENVRA ISDALDKYHK 250 260 270 280 290 300 ETGLDIPIHV DAASGGFVAP FITPDLVWDF RLPRVKSINA SGHKYGLSPL GVGWVIWRGK 310 320 330 340 350 360 EDIHKDLIFN VNYLGGNMPT FSLNFSRPGG QIVSQYYNFI RHGREGYRAI HQACIDHGVY 370 380 390 400 410 420 IGEEIKKMGI FDLIYDGKGA LPGVCWLLKK DAKVKFNLFD LSDRMKTRGW QIASYTLPKN 430 440 450 460 470 AESMIITRVL IRHGFSRDMA SLLIDDIKRC LEYFEKHPLV KPLSKEEGEG FHH

References

[1]

"Comparative genomics of the social amoebae Dictyostelium discoideum and Dictyostelium purpureum." US DOE Joint Genome Institute (JGI-PGF) Sucgang R., Kuo A., Tian X., Salerno W., Parikh A., Feasley C.L., Dalin E., Tu H., Huang E., Barry K., Lindquist E., Shapiro H., Bruce D., Schmutz J., Salamov A., Fey P., Gaudet P., Anjard C. , Babu M.M., Basu S., Bushmanova Y., van der Wel H., Katoh-Kurasawa M., Dinh C., Coutinho P.M., Saito T., Elias M., Schaap P., Kay R.R., Henrissat B., Eichinger L., Rivero F., Putnam N.H., West C.M., Loomis W.F., Chisholm R.L., Shaulsky G., Strassmann J.E., Queller D.C., Kuspa A., Grigoriev I.V. Genome Biol. 12:R20.1-R20.23(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: QSDP1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	GL870942 Genomic DNA. Translation: EGC40506.1.
RefSeq	XP_003283053.1. XM_003283005.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	10503472.
KEGG	dpp:DICPUDRAFT_146669.
Phylogenomic databases
KO	K01580.
OMA	PMDKEHM.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. [Graphical view]
PANTHER	PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

F0Z6K2_DICPU

Accession

Primary (citable) accession number: F0Z6K2

Entry history

Integrated into UniProtKB/TrEMBL:	May 3, 2011
Last sequence update:	May 3, 2011
Last modified:	March 6, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)