Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Catalase

Gene

RIA_0786

Organism
Riemerella anatipestifer (strain RA-GD)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

2 H2O2 = O2 + 2 H2O.UniRule annotation

Cofactori

hemeUniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei54 – 541UniRule annotation
Active sitei127 – 1271UniRule annotation
Metal bindingi337 – 3371Iron (heme axial ligand)UniRule annotation

GO - Molecular functioni

  1. catalase activity Source: UniProtKB-EC
  2. heme binding Source: InterPro
  3. metal ion binding Source: UniProtKB-KW

GO - Biological processi

  1. hydrogen peroxide catabolic process Source: UniProtKB-KW
  2. response to oxidative stress Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Oxidoreductase, Peroxidase

Keywords - Biological processi

Hydrogen peroxideUniRule annotation

Keywords - Ligandi

HemeUniRule annotation, Iron, Metal-binding

Enzyme and pathway databases

BioCyciRANA992406:GLJP-759-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
CatalaseUniRule annotation (EC:1.11.1.6UniRule annotation)
Gene namesi
Ordered Locus Names:RIA_0786Imported
OrganismiRiemerella anatipestifer (strain RA-GD)Imported
Taxonomic identifieri992406 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeRiemerella
ProteomesiUP000007492: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the catalase family.UniRule annotation

Phylogenomic databases

KOiK03781.
OMAiWDYRADD.

Family and domain databases

Gene3Di2.40.180.10. 1 hit.
InterProiIPR018028. Catalase.
IPR020835. Catalase-like_dom.
IPR024708. Catalase_AS.
IPR024711. Catalase_clade1/3.
IPR011614. Catalase_core.
IPR002226. Catalase_haem_BS.
IPR010582. Catalase_immune_responsive.
[Graphical view]
PANTHERiPTHR11465. PTHR11465. 1 hit.
PfamiPF00199. Catalase. 1 hit.
PF06628. Catalase-rel. 1 hit.
[Graphical view]
PIRSFiPIRSF038928. Catalase_clade1-3. 1 hit.
PRINTSiPR00067. CATALASE.
SMARTiSM01060. Catalase. 1 hit.
[Graphical view]
SUPFAMiSSF56634. SSF56634. 1 hit.
PROSITEiPS00437. CATALASE_1. 1 hit.
PS00438. CATALASE_2. 1 hit.
PS51402. CATALASE_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F0TMD0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSHKKLTTVS GSPYYEYEDS QTVGSRGPVL LQDFVLQEKL AHFVRERIPE
60 70 80 90 100
RVVHAKGTGA YGTFTVTNDI TKYTKAKLFS KVGNTCKMFA RFSTVGGEKG
110 120 130 140 150
SADTERDPRG FALKFYTEDG NWDLVGNNTP VFFIKDAKKF SDFIHTQKRH
160 170 180 190 200
PKTNLKSHTM MWDFWSLNPE SLHQVLILMS DRGTPYGYRH MHGFGSHTFS
210 220 230 240 250
MINANNERVW VKFNFKTQQG IKNFTDEEAV KMKGENPDFA QEDLVNAIES
260 270 280 290 300
GNFPKWTLYI QVMTEEQANE FRWNPFDITK VWPHSEFPLI EVGEMELNKI
310 320 330 340 350
PNNYFAEVEQ SVFAPSNIID GIGLSPDKML QGRIFSYPDA HRYRVGVNAY
360 370 380 390 400
QLQVNRCPFS VNHYHRDGAM ADASNYKDSP NYYPNSFDDI KPDSSYKAHE
410 420 430 440 450
YHLDNNKVAF FNRNENDDDH FTQPGLLYSK AMDDQARANL VKNIINHMQK
460 470 480 490
IDGERREEII NRQLCHFFRA NLDLGMKVAS GLGISINFND MHQQK
Length:495
Mass (Da):57,097
Last modified:May 3, 2011 - v1
Checksum:iDAB4E00359633B60
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002562 Genomic DNA. Translation: ADZ11927.1.
RefSeqiYP_006017272.1. NC_017569.1.

Genome annotation databases

EnsemblBacteriaiADZ11927; ADZ11927; RIA_0786.
GeneIDi12612995.
KEGGirar:RIA_0786.
PATRICi47188540. VBIRieAna184287_0770.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002562 Genomic DNA. Translation: ADZ11927.1.
RefSeqiYP_006017272.1. NC_017569.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADZ11927; ADZ11927; RIA_0786.
GeneIDi12612995.
KEGGirar:RIA_0786.
PATRICi47188540. VBIRieAna184287_0770.

Phylogenomic databases

KOiK03781.
OMAiWDYRADD.

Enzyme and pathway databases

BioCyciRANA992406:GLJP-759-MONOMER.

Family and domain databases

Gene3Di2.40.180.10. 1 hit.
InterProiIPR018028. Catalase.
IPR020835. Catalase-like_dom.
IPR024708. Catalase_AS.
IPR024711. Catalase_clade1/3.
IPR011614. Catalase_core.
IPR002226. Catalase_haem_BS.
IPR010582. Catalase_immune_responsive.
[Graphical view]
PANTHERiPTHR11465. PTHR11465. 1 hit.
PfamiPF00199. Catalase. 1 hit.
PF06628. Catalase-rel. 1 hit.
[Graphical view]
PIRSFiPIRSF038928. Catalase_clade1-3. 1 hit.
PRINTSiPR00067. CATALASE.
SMARTiSM01060. Catalase. 1 hit.
[Graphical view]
SUPFAMiSSF56634. SSF56634. 1 hit.
PROSITEiPS00437. CATALASE_1. 1 hit.
PS00438. CATALASE_2. 1 hit.
PS51402. CATALASE_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Complete genome sequence of pathogenic bacterium Riemerella anatipestifer strain RA-GD."
    Yuan J., Liu W., Sun M., Song S., Cai J., Hu S.
    J. Bacteriol. 193:2896-2897(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: RA-GDImported.
  2. "Complete Genome Sequence of Pathogenic Bacterium Riemerella anatipestifer Strain RA-GD."
    Yuan J., Liu W., Sun M., Song S., Cai J., Hu S.
    Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: RA-GD.

Entry informationi

Entry nameiF0TMD0_RIEAR
AccessioniPrimary (citable) accession number: F0TMD0
Entry historyi
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: March 4, 2015
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.