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F0TMD0 (F0TMD0_RIEAR) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length495 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

2 H2O2 = O2 + 2 H2O. RuleBase RU000498

Cofactor

Heme group By similarity. PIRSR PIRSR038928-2

Sequence similarities

Belongs to the catalase family. RuleBase RU000498

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site541 By similarity PIRSR PIRSR038928-1
Active site1271 By similarity PIRSR PIRSR038928-1
Metal binding3371Iron (heme axial ligand) By similarity PIRSR PIRSR038928-2

Sequences

Sequence LengthMass (Da)Tools
F0TMD0 [UniParc].

Last modified May 3, 2011. Version 1.
Checksum: DAB4E00359633B60

FASTA49557,097
        10         20         30         40         50         60 
MSHKKLTTVS GSPYYEYEDS QTVGSRGPVL LQDFVLQEKL AHFVRERIPE RVVHAKGTGA 

        70         80         90        100        110        120 
YGTFTVTNDI TKYTKAKLFS KVGNTCKMFA RFSTVGGEKG SADTERDPRG FALKFYTEDG 

       130        140        150        160        170        180 
NWDLVGNNTP VFFIKDAKKF SDFIHTQKRH PKTNLKSHTM MWDFWSLNPE SLHQVLILMS 

       190        200        210        220        230        240 
DRGTPYGYRH MHGFGSHTFS MINANNERVW VKFNFKTQQG IKNFTDEEAV KMKGENPDFA 

       250        260        270        280        290        300 
QEDLVNAIES GNFPKWTLYI QVMTEEQANE FRWNPFDITK VWPHSEFPLI EVGEMELNKI 

       310        320        330        340        350        360 
PNNYFAEVEQ SVFAPSNIID GIGLSPDKML QGRIFSYPDA HRYRVGVNAY QLQVNRCPFS 

       370        380        390        400        410        420 
VNHYHRDGAM ADASNYKDSP NYYPNSFDDI KPDSSYKAHE YHLDNNKVAF FNRNENDDDH 

       430        440        450        460        470        480 
FTQPGLLYSK AMDDQARANL VKNIINHMQK IDGERREEII NRQLCHFFRA NLDLGMKVAS 

       490 
GLGISINFND MHQQK 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence of the pathogenic bacterium Riemerella anatipestifer strain RA-GD."
Yuan J., Liu W., Sun M., Song S., Cai J., Hu S.
J. Bacteriol. 193:2896-2897(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: RA-GD EMBL ADZ11927.1.
[2]"Complete Genome Sequence of Pathogenic Bacterium Riemerella anatipestifer Strain RA-GD."
Yuan J., Liu W., Sun M., Song S., Cai J., Hu S.
Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: RA-GD.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002562 Genomic DNA. Translation: ADZ11927.1.
RefSeqYP_006017272.1. NC_017569.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADZ11927; ADZ11927; RIA_0786.
GeneID12612995.
KEGGrar:RIA_0786.
PATRIC47188540. VBIRieAna184287_0770.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK03781.
OMAQQYLTSQ.

Enzyme and pathway databases

BioCycRANA992406:GLJP-759-MONOMER.

Family and domain databases

Gene3D2.40.180.10. 1 hit.
InterProIPR018028. Catalase.
IPR020835. Catalase-like_dom.
IPR024708. Catalase_AS.
IPR024711. Catalase_clade1/3.
IPR011614. Catalase_core.
IPR002226. Catalase_haem_BS.
IPR010582. Catalase_immune_responsive.
[Graphical view]
PANTHERPTHR11465. PTHR11465. 1 hit.
PfamPF00199. Catalase. 1 hit.
PF06628. Catalase-rel. 1 hit.
[Graphical view]
PIRSFPIRSF038928. Catalase_clade1-3. 1 hit.
PRINTSPR00067. CATALASE.
SMARTSM01060. Catalase. 1 hit.
[Graphical view]
SUPFAMSSF56634. SSF56634. 1 hit.
PROSITEPS00437. CATALASE_1. 1 hit.
PS00438. CATALASE_2. 1 hit.
PS51402. CATALASE_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF0TMD0_RIEAR
AccessionPrimary (citable) accession number: F0TMD0
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: January 22, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)