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F0TDZ2 (F0TDZ2_LACA3) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118

Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tuf HAMAP-Rule MF_00118
Ordered Locus Names:LAC30SC_04240 EMBL ADZ07013.1
OrganismLactobacillus acidophilus (strain 30SC) [Complete proteome] [HAMAP] EMBL ADZ07013.1
Taxonomic identifier891391 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus

Protein attributes

Sequence length396 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. HAMAP-Rule MF_00118 RuleBase RU000325

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. HAMAP-Rule MF_00118 RuleBase RU000325

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding20 – 278GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding82 – 865GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding137 – 1404GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
F0TDZ2 [UniParc].

Last modified May 3, 2011. Version 1.
Checksum: E602B747E98352C4

FASTA39643,590
        10         20         30         40         50         60 
MAEKEHYVRT KPHVNIGTIG HVDHGKTTLT AAITTVLAEK GLAKAEDYSQ IDAAPEEKER 

        70         80         90        100        110        120 
GITINTAHVE YETENRHYAH MDAPGHADYI KNMITGAAQM DGAILVVAAT DGPMPQTREH 

       130        140        150        160        170        180 
ILLARQVGVN YIVVFLNKCD LVDDPELIDL VEMEVRDLLT EYDYPGDDIP VVRGSALKAL 

       190        200        210        220        230        240 
QGDKEAQEQI LKLMDIVDEY IPTPERQTDK PFLMPVEDVF TITGRGTVAS GRIDRGTVKI 

       250        260        270        280        290        300 
GDEVEIVGLV DKVLKSVVTG LEMFHKTLDL GEAGDNVGVL LRGIDRDQVV RGQVLAAPGS 

       310        320        330        340        350        360 
IQTHEKFKGQ VYVLKKDEGG RHTPFFSDYR PQFYFHTTDI TGEIELPEGT EMVMPGDNTE 

       370        380        390 
FTVTLIKPAA IEKGTKFTIR EGGRTVGAGQ VTEILD 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequencing of Lactobacillus acidophilus 30SC, isolated from swine intestine."
Oh S., Roh H., Ko H.J., Kim S., Kim K.H., Lee S.E., Chang I.S., Kim S., Choi I.G.
J. Bacteriol. 193:2882-2883(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 30SC EMBL ADZ07013.1.
[2]Roh H., Ko H.-J., Kim S.-H., Choi I.-G., Oh S.
Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 30SC.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002559 Genomic DNA. Translation: ADZ07013.1.
RefSeqYP_004291952.1. NC_015214.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADZ07013; ADZ07013; LAC30SC_04240.
GeneID10275189.
KEGGlai:LAC30SC_04240.
PATRIC46964455. VBILacAci171603_0838.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK02358.
OMAVTPHTEF.

Enzyme and pathway databases

BioCycLACI891391:GHOY-882-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF0TDZ2_LACA3
AccessionPrimary (citable) accession number: F0TDZ2
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: April 16, 2014
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)