Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Y414 protein

Gene

Metbo_0299

Organism
Methanobacterium lacus (strain AL-21)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciMSP868132:GI5U-309-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Y414 proteinImported
Gene namesi
Ordered Locus Names:Metbo_0299Imported
OrganismiMethanobacterium lacus (strain AL-21)Imported
Taxonomic identifieri877455 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanobacteriaMethanobacterialesMethanobacteriaceaeMethanobacterium
ProteomesiUP000007490: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF0T8D9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK07468.
OMAiEEKMNGY.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.

Sequencei

Sequence statusi: Complete.

F0T8D9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSVKVGKSKS HKIFFLSCDE CGQEIEVSMP EFIIGILPKM LDLKSENLER
60 70 80 90 100
SFKNGNIKFY SGQGVEGLQF RKDVGHIESG TMICFGNKIE IVRGFPKIRR
110 120 130 140 150
TLLLNPSLVN HFKTEVAVEE KMNGYNVRLA LISQKIKAFT RGGYICPYTT
160 170 180 190 200
KKAPEILDME DFFNDNPELV ICGEMVGTEN PYVTHHYREI GKLGFRIFDL
210 220 230 240 250
RYKTTNEPLN IKEKYQLLDS YNLPSVKSYG IIPIEEAVER IFDIIQVMGQ
260 270 280 290 300
EDREGVVIKD PEMELEPVKY TTSRAHLGEI EYAFNYPFDF GRSFFFSRVI
310 320 330 340 350
REGFQAFELD ESEEEIRKRA HLLGESILFP MVNTIKHVSG DNSAFEDIVI
360 370 380 390 400
HVENNTDAEE FARHLRDLGV VAIVQSFDDG KAVIRRIHQS TTDRISNYLR

GGLY
Length:404
Mass (Da):46,372
Last modified:May 3, 2011 - v1
Checksum:iAB785F6830691FCE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002551 Genomic DNA. Translation: ADZ08551.1.
RefSeqiWP_013643902.1. NC_015216.1.
YP_004289523.1. NC_015216.1.

Genome annotation databases

EnsemblBacteriaiADZ08551; ADZ08551; Metbo_0299.
GeneIDi10276731.
KEGGimel:Metbo_0299.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002551 Genomic DNA. Translation: ADZ08551.1.
RefSeqiWP_013643902.1. NC_015216.1.
YP_004289523.1. NC_015216.1.

3D structure databases

ProteinModelPortaliF0T8D9.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADZ08551; ADZ08551; Metbo_0299.
GeneIDi10276731.
KEGGimel:Metbo_0299.

Phylogenomic databases

KOiK07468.
OMAiEEKMNGY.

Enzyme and pathway databases

BioCyciMSP868132:GI5U-309-MONOMER.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: AL-21Imported.

Entry informationi

Entry nameiF0T8D9_METLA
AccessioniPrimary (citable) accession number: F0T8D9
Entry historyi
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: January 7, 2015
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.