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F0T8D9 (F0T8D9_METSL) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Metbo_0299 EMBL ADZ08551.1
OrganismMethanobacterium sp. (strain AL-21) [Complete proteome] [HAMAP] EMBL ADZ08551.1
Taxonomic identifier868132 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaMethanobacteriaMethanobacterialesMethanobacteriaceaeMethanobacterium

Protein attributes

Sequence length404 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F0T8D9 [UniParc].

Last modified May 3, 2011. Version 1.
Checksum: AB785F6830691FCE

FASTA40446,372
        10         20         30         40         50         60 
MSVKVGKSKS HKIFFLSCDE CGQEIEVSMP EFIIGILPKM LDLKSENLER SFKNGNIKFY 

        70         80         90        100        110        120 
SGQGVEGLQF RKDVGHIESG TMICFGNKIE IVRGFPKIRR TLLLNPSLVN HFKTEVAVEE 

       130        140        150        160        170        180 
KMNGYNVRLA LISQKIKAFT RGGYICPYTT KKAPEILDME DFFNDNPELV ICGEMVGTEN 

       190        200        210        220        230        240 
PYVTHHYREI GKLGFRIFDL RYKTTNEPLN IKEKYQLLDS YNLPSVKSYG IIPIEEAVER 

       250        260        270        280        290        300 
IFDIIQVMGQ EDREGVVIKD PEMELEPVKY TTSRAHLGEI EYAFNYPFDF GRSFFFSRVI 

       310        320        330        340        350        360 
REGFQAFELD ESEEEIRKRA HLLGESILFP MVNTIKHVSG DNSAFEDIVI HVENNTDAEE 

       370        380        390        400 
FARHLRDLGV VAIVQSFDDG KAVIRRIHQS TTDRISNYLR GGLY 

« Hide

References

[1]"Complete sequence of Methanobacterium sp. AL-21."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Mikhailova N., Pagani I., Cadillo-Quiroz H., Imachi H. expand/collapse author list , Zinder S., Liu W., Woyke T.
Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: AL-21 EMBL ADZ08551.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002551 Genomic DNA. Translation: ADZ08551.1.
RefSeqYP_004289523.1. NC_015216.1.

3D structure databases

ProteinModelPortalF0T8D9.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADZ08551; ADZ08551; Metbo_0299.
GeneID10276731.
KEGGmel:Metbo_0299.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK07468.
OMAEEKMNGY.

Enzyme and pathway databases

BioCycMSP868132:GI5U-309-MONOMER.

Family and domain databases

InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSPR01048. Y414FAMILY.
TIGRFAMsTIGR01209. TIGR01209. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF0T8D9_METSL
AccessionPrimary (citable) accession number: F0T8D9
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: April 16, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)