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Protein
Submitted name:

Glutamate decarboxylase

Gene

Metbo_1424

Organism
Methanobacterium lacus (strain AL-21)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationImported

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciMSP868132:GI5U-1453-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Glutamate decarboxylaseImported (EC:4.1.1.15Imported)
Gene namesi
Ordered Locus Names:Metbo_1424Imported
OrganismiMethanobacterium lacus (strain AL-21)Imported
Taxonomic identifieri877455 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanobacteriaMethanobacterialesMethanobacteriaceaeMethanobacterium
ProteomesiUP000007490 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi868132.Metbo_1424.

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

KOiK01580.
OMAiFVGTWMD.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

F0T836-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIIFVKIKIV EENKKMLSEK KNLDEMDDHE KEQTTTYGSR YFTKSIPKYI
60 70 80 90 100
VPDEGMPPRA AYQLIHDELN LDGNPALNLA SFVTTWMEPE ADLLMVESMG
110 120 130 140 150
KNYVDNDEYP QTEVIQDRVV NMLARLFNAP EDCKSVGSAT IGSSEAIMLG
160 170 180 190 200
LLAHKWTWRS RMEAEGKPTD KPNIVMGADV HTVWEKFARY FDVELKLIPL
210 220 230 240 250
REDIYTITAE DVVKEIDENT IAVGAVIGTT FTGQMDPIED INNALLEVKK
260 270 280 290 300
TKGWDIPIHV DGASGGFIAP FIYPDLPWDF RLEQVRSINV SGHKYGLVYP
310 320 330 340 350
GVGWLVFKDK SDLPDDLIFN INYLGGLMPN YSLNFSKGSN TIIAQYYNFI
360 370 380 390 400
RLGMKGYTKI MENMLENARF LGKKLEETGK FEILNDKILF PLIAVKLKNC
410 420 430 440 450
DFDAFHLSEH LREKGWIVPA YTLPPNADDI TVLRMVIKES FSKDMVEMLF
460 470 480
KDIMASIKTL NQSLNERRKA IDEKGNPTLL Y
Length:481
Mass (Da):54,813
Last modified:May 3, 2011 - v1
Checksum:iAA97A3BEB484305D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002551 Genomic DNA. Translation: ADZ09662.1.
RefSeqiWP_013645013.1. NC_015216.1.
YP_004290634.1. NC_015216.1.

Genome annotation databases

EnsemblBacteriaiADZ09662; ADZ09662; Metbo_1424.
GeneIDi10277875.
KEGGimel:Metbo_1424.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002551 Genomic DNA. Translation: ADZ09662.1.
RefSeqiWP_013645013.1. NC_015216.1.
YP_004290634.1. NC_015216.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi868132.Metbo_1424.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADZ09662; ADZ09662; Metbo_1424.
GeneIDi10277875.
KEGGimel:Metbo_1424.

Phylogenomic databases

KOiK01580.
OMAiFVGTWMD.

Enzyme and pathway databases

BioCyciMSP868132:GI5U-1453-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: AL-21Imported.

Entry informationi

Entry nameiF0T836_METLA
AccessioniPrimary (citable) accession number: F0T836
Entry historyi
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: June 24, 2015
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.