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F0T6G4 (F0T6G4_METSL) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Metbo_2385 EMBL ADZ10598.1
OrganismMethanobacterium sp. (strain AL-21) [Complete proteome] [HAMAP] EMBL ADZ10598.1
Taxonomic identifier868132 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaMethanobacteriaMethanobacterialesMethanobacteriaceaeMethanobacterium

Protein attributes

Sequence length301 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
F0T6G4 [UniParc].

Last modified May 3, 2011. Version 1.
Checksum: 89FDD33659386F58

FASTA30134,743
        10         20         30         40         50         60 
MNMIEPMLAT LTDPSSLDPT DSWIIEPKYD GERIIAMNYG GKIVLWTRRN IQATHKFPEI 

        70         80         90        100        110        120 
VEALNKNIHD DNWIVDGEMT VKGGFRQLLN RNVEDRFKIS LLSKKIPATY NIFDIVCYNK 

       130        140        150        160        170        180 
QDISKKNLYE RKSVLLHSVD EDERIKIVQF DVLKDPEKQF NQYITDGYEG AVIKNLDSNY 

       190        200        210        220        230        240 
EFGQRSKNWL KVKKGDTVDV HIIGATKSAS SIPFGALMME KDGKYFGKVG TGFSDKEREE 

       250        260        270        280        290        300 
ILRMLMENQQ PLTIDIPADL ESEVLVTSKP FPAEIKMQEM IKRSPRAPVW VRFRWDDVSS 


K 

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References

[1]"Complete sequence of Methanobacterium sp. AL-21."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Mikhailova N., Pagani I., Cadillo-Quiroz H., Imachi H. expand/collapse author list , Zinder S., Liu W., Woyke T.
Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: AL-21 EMBL ADZ10598.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002551 Genomic DNA. Translation: ADZ10598.1.
RefSeqYP_004291570.1. NC_015216.1.

3D structure databases

ProteinModelPortalF0T6G4.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADZ10598; ADZ10598; Metbo_2385.
GeneID10278851.
KEGGmel:Metbo_2385.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.
OMAATYNIFD.

Enzyme and pathway databases

BioCycMSP868132:GI5U-2429-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF0T6G4_METSL
AccessionPrimary (citable) accession number: F0T6G4
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: October 16, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)