F0T6G4 (F0T6G4_METSL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase EMBL ADZ10598.1

Gene names

Ordered Locus Names:

Metbo_2385 EMBL ADZ10598.1

Organism

Methanobacterium sp. (strain AL-21) [Complete proteome] [HAMAP]

Taxonomic identifier

868132 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Euryarchaeota › Methanobacteria › Methanobacteriales › Methanobacteriaceae › Methanobacterium

Protein attributes

Sequence length	301 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ADZ10598.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F0T6G4 [UniParc]. Last modified May 3, 2011. Version 1. Checksum: 89FDD33659386F58	FASTA	301	34,743
	10 20 30 40 50 60 MNMIEPMLAT LTDPSSLDPT DSWIIEPKYD GERIIAMNYG GKIVLWTRRN IQATHKFPEI 70 80 90 100 110 120 VEALNKNIHD DNWIVDGEMT VKGGFRQLLN RNVEDRFKIS LLSKKIPATY NIFDIVCYNK 130 140 150 160 170 180 QDISKKNLYE RKSVLLHSVD EDERIKIVQF DVLKDPEKQF NQYITDGYEG AVIKNLDSNY 190 200 210 220 230 240 EFGQRSKNWL KVKKGDTVDV HIIGATKSAS SIPFGALMME KDGKYFGKVG TGFSDKEREE 250 260 270 280 290 300 ILRMLMENQQ PLTIDIPADL ESEVLVTSKP FPAEIKMQEM IKRSPRAPVW VRFRWDDVSS K

References

[1]

"Complete sequence of Methanobacterium sp. AL-21." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Mikhailova N., Pagani I., Cadillo-Quiroz H., Imachi H. , Zinder S., Liu W., Woyke T. Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: AL-21 EMBL ADZ10598.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002551 Genomic DNA. Translation: ADZ10598.1.
RefSeq	YP_004291570.1. NC_015216.1.
3D structure databases
ProteinModelPortal	F0T6G4.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADZ10598; ADZ10598; Metbo_2385.
GeneID	10278851.
KEGG	mel:Metbo_2385.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01971.
OMA	RNIQATH.
Enzyme and pathway databases
BioCyc	MSP868132:GI5U-2430-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS00333. DNA_LIGASE_A2. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F0T6G4_METSL

Accession

Primary (citable) accession number: F0T6G4

Entry history

Integrated into UniProtKB/TrEMBL:	May 3, 2011
Last sequence update:	May 3, 2011
Last modified:	May 1, 2013
This is version 12 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)