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F0T2I5 (F0T2I5_SYNGF) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Sgly_0962 EMBL ADY55303.1
OrganismSyntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) [Complete proteome] [HAMAP] EMBL ADY55303.1
Taxonomic identifier645991 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesPeptococcaceaeSyntrophobotulus

Protein attributes

Sequence length813 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
F0T2I5 [UniParc].

Last modified May 3, 2011. Version 1.
Checksum: 3C1CA60488E450A8

FASTA81391,729
        10         20         30         40         50         60 
MDRKLNDYNE KRNFARTTEP EGAREMAREG LRFVVQHHLA RRDHYDFRLE WDGALLSWAV 

        70         80         90        100        110        120 
PKGPSYNTRD KRLAVQVEDH PLEYRNFEGT IPKGEYGGGV VMLWDEGYWE PDGNVDDGLR 

       130        140        150        160        170        180 
AGMLKFVLKG RRLKGKWALV RLKKKAGETK DNWLLLKEKD QYAKTGDEVS QFATSIRTGR 

       190        200        210        220        230        240 
TMKEIEEGED EKITPNPFGS TGVQLAKLVR MVPEGEDWLY ELKYDGYRIV AYMEGGSARL 

       250        260        270        280        290        300 
LTRNGRDYTA RFPDVASSLS DWAGGRAMIL DGEMAVTDAA GRTDFQALQN YLNNAQAQSL 

       310        320        330        340        350        360 
TYIIFDLLAL DGADLRGHRL LDRKGTLEAL LKDAPENLYY SRHVSGNGRE SFAAACAAGL 

       370        380        390        400        410        420 
EGIIGKKADS LYSGTRNGDW IKLKCEQRQE FVIGGYTLSA KKTSGVSSLL LGVYEGQGLV 

       430        440        450        460        470        480 
YAGRAGTGLS EAGRRELAEK FAGRERTEPP FRLPPKARAN EKITWLEPEL VAEIKFAEWT 

       490        500        510        520        530        540 
KDDLLRQASF KGLRTDKKPE EIKREKTDGE RQPPPSAKET ERAMEANTNS IMIEGIKITN 

       550        560        570        580        590        600 
PDKVIFTDPE TTKGDVVRYY AQVAERMLPY VSRRVLSIVR CPKGIAQTCF YKKHPGPGSK 

       610        620        630        640        650        660 
GIVTIPVTNS DGETEEYFYI ENTSGLIAEA QMGTLEFHTW GSRADELEKP DLMVFDLDPD 

       670        680        690        700        710        720 
EGMDLSRVRQ GVRDMKDLLT ELSLRAYLKT SGGKGYHVVV PLKPSVSWDR FYDFARRVAE 

       730        740        750        760        770        780 
VMEQKWPDRY TSNVRKAKRA GKIFIDWMRN GRGATSIAPY SLRAREGTRV SMPIAWEELD 

       790        800        810 
TVAPDSVNMA EALRRIGGND PWQGFFRNGQ QLK 

« Hide

References

[1]"The complete genome of Syntrophobotulus glycolicus DSM 8271."
Lucas S., Copeland A., Lapidus A., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Pagani I., Ivanova N., Mikhailova N., Chertkov O., Held B., Detter J.C., Tapia R., Han C., Land M., Hauser L. expand/collapse author list , Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Spring S., Schroeder M., Brambilla E., Klenk H.-P., Eisen J.A.
Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 8271 / FlGlyR.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002547 Genomic DNA. Translation: ADY55303.1.
RefSeqYP_004265304.1. NC_015172.1.

3D structure databases

ProteinModelPortalF0T2I5.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADY55303; ADY55303; Sgly_0962.
GeneID10248142.
KEGGsgy:Sgly_0962.
PATRIC47032618. VBISynGly105927_1038.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.
OMAHPLDYAD.

Enzyme and pathway databases

BioCycSGLY645991:GHJ4-987-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF0T2I5_SYNGF
AccessionPrimary (citable) accession number: F0T2I5
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: April 16, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)