Skip Header

Contribute Send feedback
Read comments (?) or add your own

F0SXB6 (F0SXB6_SYNGF) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Alanine racemase EMBL ADY56976.1
EC=5.1.1.1 EMBL ADY56976.1
Gene names
Ordered Locus Names:Sgly_2703
OrganismSyntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) [Complete proteome] [HAMAP] EMBL ADY56976.1
Taxonomic identifier645991 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Clostridiales › Peptococcaceae › Syntrophobotulus ›

Protein attributes

Sequence length376 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-alanine = D-alanine. SAAS SAAS020622 RuleBase RU000608

Cofactor

Pyridoxal phosphate By similarity. SAAS SAAS020622 RuleBase RU000608

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. RuleBase RU004247 SAAS SAAS020622

Sequence similarities

Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
   LigandPyridoxal phosphate SAAS SAAS020622 RuleBase RU000608
   Molecular functionIsomerase SAAS SAAS020622 RuleBase RU000608 EMBL ADY56976.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processD-alanine biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-UniPathway

   Molecular_functionalanine racemase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F0SXB6 [UniParc].

Last modified May 3, 2011. Version 1.
Checksum: 2EF60465963781AD

FASTA37641,495
        10         20         30         40         50         60 
MHGMRPAWAC IDLGALRRNY RRICRQTNSE VMAIVKANAY GHGALEIVRT LKEEGVRRFG 

        70         80         90        100        110        120 
VAILEEALQI REKFPEVTVM LIGPTMPDQA ERIVAEGIIP EVFRLEQAEA FSLEAEKKGI 

       130        140        150        160        170        180 
PAILHIKVDT GMGRIGFQED ALENILKIAQ LPGIEIEGIY THLATADEID LGFAFTQLKR 

       190        200        210        220        230        240 
FDGLYESLKT AGLNIPMRHV ANSAAILQLR DQEYELCRPG LMLYGQLPMN HWEGENGFEP 

       250        260        270        280        290        300 
LMSLKARIVH LKKIAAGDSV SYGRTFIAQA PTLVATLPLG YADGLRRSLS NNWNVIVKGR 

       310        320        330        340        350        360 
YAPVIGRICM DQTMIDVTGI EGVEIGDEVT ILGSEGKSSL TAAQMAECAG TISYEILCGI 

       370 
SQRVPRVYID TSQIPK

« Hide

References

[1]"The complete genome of Syntrophobotulus glycolicus DSM 8271."
Lucas S., Copeland A., Lapidus A., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Pagani I., Ivanova N., Mikhailova N., Chertkov O., Held B., Detter J.C., Tapia R., Han C., Land M., Hauser L. expand/collapse author list , Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Spring S., Schroeder M., Brambilla E., Klenk H.-P., Eisen J.A.
Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 8271 / FlGlyR.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002547 Genomic DNA. Translation: ADY56976.1.
RefSeqYP_004266977.1. NC_015172.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADY56976; ADY56976; Sgly_2703.
GeneID10249921.
KEGGsgy:Sgly_2703.
PATRIC47036420. VBISynGly105927_2897.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01775.

Enzyme and pathway databases

BioCycSGLY645991:GHJ4-2766-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF0SXB6_SYNGF
AccessionPrimary (citable) accession number: F0SXB6
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: April 3, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info