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F0SXB6 (F0SXB6_SYNGF) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length376 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. RuleBase RU004247 HAMAP-Rule MF_01201 SAAS SAAS009006

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 SAAS SAAS009006

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. RuleBase RU004247 HAMAP-Rule MF_01201

Sequence similarities

Belongs to the alanine racemase family. HAMAP-Rule MF_01201 RuleBase RU004188

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site361Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2621Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1341Substrate By similarity HAMAP-Rule MF_01201
Binding site3101Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue361N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
F0SXB6 [UniParc].

Last modified May 3, 2011. Version 1.
Checksum: 2EF60465963781AD

FASTA37641,495
        10         20         30         40         50         60 
MHGMRPAWAC IDLGALRRNY RRICRQTNSE VMAIVKANAY GHGALEIVRT LKEEGVRRFG 

        70         80         90        100        110        120 
VAILEEALQI REKFPEVTVM LIGPTMPDQA ERIVAEGIIP EVFRLEQAEA FSLEAEKKGI 

       130        140        150        160        170        180 
PAILHIKVDT GMGRIGFQED ALENILKIAQ LPGIEIEGIY THLATADEID LGFAFTQLKR 

       190        200        210        220        230        240 
FDGLYESLKT AGLNIPMRHV ANSAAILQLR DQEYELCRPG LMLYGQLPMN HWEGENGFEP 

       250        260        270        280        290        300 
LMSLKARIVH LKKIAAGDSV SYGRTFIAQA PTLVATLPLG YADGLRRSLS NNWNVIVKGR 

       310        320        330        340        350        360 
YAPVIGRICM DQTMIDVTGI EGVEIGDEVT ILGSEGKSSL TAAQMAECAG TISYEILCGI 

       370 
SQRVPRVYID TSQIPK 

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References

[1]"The complete genome of Syntrophobotulus glycolicus DSM 8271."
Lucas S., Copeland A., Lapidus A., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Pagani I., Ivanova N., Mikhailova N., Chertkov O., Held B., Detter J.C., Tapia R., Han C., Land M., Hauser L. expand/collapse author list , Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Spring S., Schroeder M., Brambilla E., Klenk H.-P., Eisen J.A.
Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 8271 / FlGlyR.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002547 Genomic DNA. Translation: ADY56976.1.
RefSeqYP_004266977.1. NC_015172.1.

3D structure databases

ProteinModelPortalF0SXB6.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADY56976; ADY56976; Sgly_2703.
GeneID10249921.
KEGGsgy:Sgly_2703.
PATRIC47036420. VBISynGly105927_2897.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01775.
OMACIDEALT.

Enzyme and pathway databases

BioCycSGLY645991:GHJ4-2766-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF0SXB6_SYNGF
AccessionPrimary (citable) accession number: F0SXB6
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: February 19, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)