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F0SQ31

- F0SQ31_PLABD

UniProt

F0SQ31 - F0SQ31_PLABD

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Plabr_3611

Organism
Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 17 (01 Oct 2014)
      Sequence version 1 (03 May 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciPBRA756272:GH5Q-3653-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Plabr_3611Imported
    OrganismiPlanctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448)Imported
    Taxonomic identifieri756272 [NCBI]
    Taxonomic lineageiBacteriaPlanctomycetesPlanctomycetiaPlanctomycetalesPlanctomycetaceaePlanctomyces
    ProteomesiUP000006860: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliF0SQ31.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F0SQ31-1 [UniParc]FASTAAdd to Basket

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    MKRFCELFRE LDGTTKTSRR HSALQDYFRE APANDAAWAT YILSGRRLKR    50
    LVKHGDLRAW GAELAELPDW LFEECYHMAG DLAETIALVI HEDRSRPVEG 100
    SLTHWMEEVV APLGEKSPEE QRTTLQHSWS QLDAWSRFVF NKLITGGLRI 150
    GVSQRSVVKA LAATFEIEPN VIAHRLMGPW EPTAEFFEQL VSEDAGEADL 200
    SQPYPFCLAH PFDAEPESLG AVEDWLADWK WDGIRAQAIR RGQAWFLWSR 250
    GEELLNERFP DFDDDLRSLP PGTVLDGELV GWKDGQVLPF GELQKRIARK 300
    RIGPKILRDV PVKFIAFDVL EHQGQDIRDT PMRQRRDTLE RLLVNRDEDS 350
    RLMISPAIEA ANWEEMASLR EQSRELGVEG IMLKHTESAY QTGRVSGSWW 400
    KWKIAPYTID AVLIYAQAGH GRRASLYTDY TFALWDGDTL VPFAKAYSGL 450
    TDAEIRKVDK FIRSNTQERF GPVRSVKAEL VFELAFENIQ ESTRHKSGVA 500
    VRFPRIHRWR QDKPPEQANT LQELKAMMPA QRLPLLEETP SAGGSE 546
    Length:546
    Mass (Da):62,521
    Last modified:May 3, 2011 - v1
    Checksum:iDBA2733AD23EFC26
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002546 Genomic DNA. Translation: ADY61208.1.
    RefSeqiYP_004271230.1. NC_015174.1.

    Genome annotation databases

    EnsemblBacteriaiADY61208; ADY61208; Plabr_3611.
    GeneIDi10241031.
    KEGGipbs:Plabr_3611.
    PATRICi47016550. VBIPlaBra152897_3886.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002546 Genomic DNA. Translation: ADY61208.1 .
    RefSeqi YP_004271230.1. NC_015174.1.

    3D structure databases

    ProteinModelPortali F0SQ31.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADY61208 ; ADY61208 ; Plabr_3611 .
    GeneIDi 10241031.
    KEGGi pbs:Plabr_3611.
    PATRICi 47016550. VBIPlaBra152897_3886.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci PBRA756272:GH5Q-3653-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448Imported.

    Entry informationi

    Entry nameiF0SQ31_PLABD
    AccessioniPrimary (citable) accession number: F0SQ31
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 3, 2011
    Last sequence update: May 3, 2011
    Last modified: October 1, 2014
    This is version 17 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3