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F0SQ31

- F0SQ31_PLABD

UniProt

F0SQ31 - F0SQ31_PLABD

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Protein
Submitted name: ATP dependent DNA ligase
Gene
Plabr_3611
Organism
Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciPBRA756272:GH5Q-3653-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Plabr_3611Imported
OrganismiPlanctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448)Imported
Taxonomic identifieri756272 [NCBI]
Taxonomic lineageiBacteriaPlanctomycetesPlanctomycetiaPlanctomycetalesPlanctomycetaceaePlanctomyces
ProteomesiUP000006860: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF0SQ31.

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F0SQ31-1 [UniParc]FASTAAdd to Basket

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MKRFCELFRE LDGTTKTSRR HSALQDYFRE APANDAAWAT YILSGRRLKR    50
LVKHGDLRAW GAELAELPDW LFEECYHMAG DLAETIALVI HEDRSRPVEG 100
SLTHWMEEVV APLGEKSPEE QRTTLQHSWS QLDAWSRFVF NKLITGGLRI 150
GVSQRSVVKA LAATFEIEPN VIAHRLMGPW EPTAEFFEQL VSEDAGEADL 200
SQPYPFCLAH PFDAEPESLG AVEDWLADWK WDGIRAQAIR RGQAWFLWSR 250
GEELLNERFP DFDDDLRSLP PGTVLDGELV GWKDGQVLPF GELQKRIARK 300
RIGPKILRDV PVKFIAFDVL EHQGQDIRDT PMRQRRDTLE RLLVNRDEDS 350
RLMISPAIEA ANWEEMASLR EQSRELGVEG IMLKHTESAY QTGRVSGSWW 400
KWKIAPYTID AVLIYAQAGH GRRASLYTDY TFALWDGDTL VPFAKAYSGL 450
TDAEIRKVDK FIRSNTQERF GPVRSVKAEL VFELAFENIQ ESTRHKSGVA 500
VRFPRIHRWR QDKPPEQANT LQELKAMMPA QRLPLLEETP SAGGSE 546
Length:546
Mass (Da):62,521
Last modified:May 3, 2011 - v1
Checksum:iDBA2733AD23EFC26
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002546 Genomic DNA. Translation: ADY61208.1.
RefSeqiYP_004271230.1. NC_015174.1.

Genome annotation databases

EnsemblBacteriaiADY61208; ADY61208; Plabr_3611.
GeneIDi10241031.
KEGGipbs:Plabr_3611.
PATRICi47016550. VBIPlaBra152897_3886.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002546 Genomic DNA. Translation: ADY61208.1 .
RefSeqi YP_004271230.1. NC_015174.1.

3D structure databases

ProteinModelPortali F0SQ31.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADY61208 ; ADY61208 ; Plabr_3611 .
GeneIDi 10241031.
KEGGi pbs:Plabr_3611.
PATRICi 47016550. VBIPlaBra152897_3886.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci PBRA756272:GH5Q-3653-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448.

Entry informationi

Entry nameiF0SQ31_PLABD
AccessioniPrimary (citable) accession number: F0SQ31
Entry historyi
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: October 16, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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