F0SQ31 (F0SQ31_PLABD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase EMBL ADY61208.1

Gene names

Ordered Locus Names:

Plabr_3611

Organism

Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) [Complete proteome] [HAMAP] EMBL ADY61208.1

Taxonomic identifier

756272 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Planctomycetes › Planctomycetia › Planctomycetales › Planctomycetaceae › Planctomyces › Planctomyces brasiliensis

Protein attributes

Sequence length	546 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ADY61208.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F0SQ31 [UniParc]. Last modified May 3, 2011. Version 1. Checksum: DBA2733AD23EFC26	FASTA	546	62,521
	10 20 30 40 50 60 MKRFCELFRE LDGTTKTSRR HSALQDYFRE APANDAAWAT YILSGRRLKR LVKHGDLRAW 70 80 90 100 110 120 GAELAELPDW LFEECYHMAG DLAETIALVI HEDRSRPVEG SLTHWMEEVV APLGEKSPEE 130 140 150 160 170 180 QRTTLQHSWS QLDAWSRFVF NKLITGGLRI GVSQRSVVKA LAATFEIEPN VIAHRLMGPW 190 200 210 220 230 240 EPTAEFFEQL VSEDAGEADL SQPYPFCLAH PFDAEPESLG AVEDWLADWK WDGIRAQAIR 250 260 270 280 290 300 RGQAWFLWSR GEELLNERFP DFDDDLRSLP PGTVLDGELV GWKDGQVLPF GELQKRIARK 310 320 330 340 350 360 RIGPKILRDV PVKFIAFDVL EHQGQDIRDT PMRQRRDTLE RLLVNRDEDS RLMISPAIEA 370 380 390 400 410 420 ANWEEMASLR EQSRELGVEG IMLKHTESAY QTGRVSGSWW KWKIAPYTID AVLIYAQAGH 430 440 450 460 470 480 GRRASLYTDY TFALWDGDTL VPFAKAYSGL TDAEIRKVDK FIRSNTQERF GPVRSVKAEL 490 500 510 520 530 540 VFELAFENIQ ESTRHKSGVA VRFPRIHRWR QDKPPEQANT LQELKAMMPA QRLPLLEETP SAGGSE

References

[1]

"The complete genome of Planctomyces brasiliensis DSM 5305." Lucas S., Copeland A., Lapidus A., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Pagani I., Ivanova N., Ovchinnikova G., Lu M., Detter J.C., Han C., Land M., Hauser L., Markowitz V., Cheng J.-F. , Hugenholtz P., Woyke T., Wu D., Tindall B., Pomrenke H.G., Brambilla E., Klenk H.-P., Eisen J.A. Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002546 Genomic DNA. Translation: ADY61208.1.
RefSeq	YP_004271230.1. NC_015174.1.
3D structure databases
ProteinModelPortal	F0SQ31.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADY61208; ADY61208; Plabr_3611.
GeneID	10241031.
KEGG	pbs:Plabr_3611.
PATRIC	47016550. VBIPlaBra152897_3886.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01971.
Enzyme and pathway databases
BioCyc	PBRA756272:GH5Q-3653-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR026333. ATP_dep_DNA_lig_pp_1105_fam. IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012308. DNA_ligase_ATP-dep_N. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. PF04675. DNA_ligase_A_N. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR04120. DNA_lig_bact. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F0SQ31_PLABD

Accession

Primary (citable) accession number: F0SQ31

Entry history

Integrated into UniProtKB/TrEMBL:	May 3, 2011
Last sequence update:	May 3, 2011
Last modified:	May 1, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)