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F0SNP8 (F0SNP8_PLABD) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length465 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
F0SNP8 [UniParc].

Last modified May 3, 2011. Version 1.
Checksum: 7EB221971E47F280

FASTA46552,380
        10         20         30         40         50         60 
MALHEKNTVR DELDDDIYAS HDLSDALPKY RFPTKERNPR HIYSLVHDEL MLDGNSRQNL 

        70         80         90        100        110        120 
ATFCQTWVEP EVHQLMNDCL DKNMVDKDEY PQTAEIEARC VHMLGDLWNS PEGANTVGCS 

       130        140        150        160        170        180 
TTGSSEAAML GGMGMKRRWE AKQKAAGRPI DKPNLITGPV QVCWHKFARY WDIELREVPM 

       190        200        210        220        230        240 
DPERLILSPE EVINRCDENT IGVVPTLGVT FTCQYEPVAD IADALDKLQE RSGLDIPIHV 

       250        260        270        280        290        300 
DGASGAFVAP FCAPDLLWDF RIPRVKSINA SGHKFGLSPL GVGWIIWREQ TDLPEELIFW 

       310        320        330        340        350        360 
VNYLGGNMRD VGLNFSRPGG QVVCQYYNFL RLGQEGYRKI HGSCYETAQY MAAEIAKLGP 

       370        380        390        400        410        420 
FEMIYSGDSQ TGIPALCWKL KPGSDPGFSL YDLADRLRCG GWQVPAYSLP ANCEDLVIQR 

       430        440        450        460 
ILVRHGVSRD LGAQLIDEFK RALDYFAKRP QQVPLTSEEA SGFHH 

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References

[1]"The complete genome of Planctomyces brasiliensis DSM 5305."
Lucas S., Copeland A., Lapidus A., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Pagani I., Ivanova N., Ovchinnikova G., Lu M., Detter J.C., Han C., Land M., Hauser L., Markowitz V., Cheng J.-F. expand/collapse author list , Hugenholtz P., Woyke T., Wu D., Tindall B., Pomrenke H.G., Brambilla E., Klenk H.-P., Eisen J.A.
Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002546 Genomic DNA. Translation: ADY58934.1.
RefSeqYP_004268956.1. NC_015174.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADY58934; ADY58934; Plabr_1322.
GeneID10238718.
KEGGpbs:Plabr_1322.
PATRIC47011534. VBIPlaBra152897_1406.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01580.

Enzyme and pathway databases

BioCycPBRA756272:GH5Q-1340-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF0SNP8_PLABD
AccessionPrimary (citable) accession number: F0SNP8
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: October 16, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)