Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Glutamate decarboxylase

Gene

Plabr_1322

Organism
Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciPBRA756272:GH5Q-1340-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
Ordered Locus Names:Plabr_1322Imported
OrganismiPlanctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448)Imported
Taxonomic identifieri756272 [NCBI]
Taxonomic lineageiBacteriaPlanctomycetesPlanctomycetiaPlanctomycetalesPlanctomycetaceaePlanctomyces
ProteomesiUP000006860 Componenti: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

KOiK01580.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

F0SNP8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALHEKNTVR DELDDDIYAS HDLSDALPKY RFPTKERNPR HIYSLVHDEL
60 70 80 90 100
MLDGNSRQNL ATFCQTWVEP EVHQLMNDCL DKNMVDKDEY PQTAEIEARC
110 120 130 140 150
VHMLGDLWNS PEGANTVGCS TTGSSEAAML GGMGMKRRWE AKQKAAGRPI
160 170 180 190 200
DKPNLITGPV QVCWHKFARY WDIELREVPM DPERLILSPE EVINRCDENT
210 220 230 240 250
IGVVPTLGVT FTCQYEPVAD IADALDKLQE RSGLDIPIHV DGASGAFVAP
260 270 280 290 300
FCAPDLLWDF RIPRVKSINA SGHKFGLSPL GVGWIIWREQ TDLPEELIFW
310 320 330 340 350
VNYLGGNMRD VGLNFSRPGG QVVCQYYNFL RLGQEGYRKI HGSCYETAQY
360 370 380 390 400
MAAEIAKLGP FEMIYSGDSQ TGIPALCWKL KPGSDPGFSL YDLADRLRCG
410 420 430 440 450
GWQVPAYSLP ANCEDLVIQR ILVRHGVSRD LGAQLIDEFK RALDYFAKRP
460
QQVPLTSEEA SGFHH
Length:465
Mass (Da):52,380
Last modified:May 3, 2011 - v1
Checksum:i7EB221971E47F280
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002546 Genomic DNA. Translation: ADY58934.1.
RefSeqiWP_013627666.1. NC_015174.1.
YP_004268956.1. NC_015174.1.

Genome annotation databases

EnsemblBacteriaiADY58934; ADY58934; Plabr_1322.
KEGGipbs:Plabr_1322.
PATRICi47011534. VBIPlaBra152897_1406.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002546 Genomic DNA. Translation: ADY58934.1.
RefSeqiWP_013627666.1. NC_015174.1.
YP_004268956.1. NC_015174.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADY58934; ADY58934; Plabr_1322.
KEGGipbs:Plabr_1322.
PATRICi47011534. VBIPlaBra152897_1406.

Phylogenomic databases

KOiK01580.

Enzyme and pathway databases

BioCyciPBRA756272:GH5Q-1340-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448Imported.

Entry informationi

Entry nameiF0SNP8_PLABD
AccessioniPrimary (citable) accession number: F0SNP8
Entry historyi
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: April 29, 2015
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.