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F0SKL7

- F0SKL7_PLABD

UniProt

F0SKL7 - F0SKL7_PLABD

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Protein

Xylose isomerase

Gene
xylA, Plabr_0003
Organism
Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

D-xylopyranose = D-xylulose.UniRule annotationSAAS annotations

Cofactori

Binds 2 magnesium ions per subunit By similarity.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei100 – 1001 By similarityUniRule annotation
Active sitei103 – 1031 By similarityUniRule annotation
Metal bindingi231 – 2311Magnesium 1 By similarityUniRule annotation
Metal bindingi267 – 2671Magnesium 1 By similarityUniRule annotation
Metal bindingi267 – 2671Magnesium 2 By similarityUniRule annotation
Metal bindingi270 – 2701Magnesium 2 By similarityUniRule annotation
Metal bindingi295 – 2951Magnesium 1 By similarityUniRule annotation
Metal bindingi306 – 3061Magnesium 2 By similarityUniRule annotation
Metal bindingi308 – 3081Magnesium 2 By similarityUniRule annotation
Metal bindingi338 – 3381Magnesium 1 By similarityUniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. xylose isomerase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. D-xylose metabolic process Source: UniProtKB-HAMAP
  2. pentose-phosphate shunt Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotationsImported

Keywords - Biological processi

Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotations, Xylose metabolismUniRule annotationSAAS annotations

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotations, Metal-bindingUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciPBRA756272:GH5Q-3-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
Gene namesi
Name:xylAUniRule annotation
Ordered Locus Names:Plabr_0003Imported
OrganismiPlanctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448)Imported
Taxonomic identifieri756272 [NCBI]
Taxonomic lineageiBacteriaPlanctomycetesPlanctomycetiaPlanctomycetalesPlanctomycetaceaePlanctomyces
ProteomesiUP000006860: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotationSAAS annotations

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotations

Interactioni

Subunit structurei

Homotetramer By similarity.UniRule annotationSAAS annotations

Structurei

3D structure databases

ProteinModelPortaliF0SKL7.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

KOiK01805.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
HAMAPiMF_00455. Xylose_isom_A.
InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamiPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSiPR00688. XYLOSISMRASE.
SUPFAMiSSF51658. SSF51658. 1 hit.
TIGRFAMsiTIGR02630. xylose_isom_A. 1 hit.
PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F0SKL7-1 [UniParc]FASTAAdd to Basket

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MSYFPDVPTI PFEGPESRNP LAFRYYNPDE MIEGQSMRDL LRFSVCYWHT    50
FRGTGGDPFG PGTAVRPWED GTDSVDMAVK RVDVAFEFIS KLGVDFYCFH 100
DRDVSPEGSS LKETNGNLDR VVARLKEKQE ETGIKLLWGT ANLFSNPRFM 150
HGAATSCNAD VFAYAAAQVK KALEVTKELG GQNYVFWGGR EGYQNLFNTD 200
MKRELDHLAR FMHMAKDYAK SIGFDGQFLF EPKPKEPTKH QYDFDVAACV 250
NFLRQYGLED TVKMNIETNH ATLAGHSMMH EMEYARIQDM LGSIDANTGD 300
LLLGWDTDQF PTDIYLTTQC MLVILKQGGL KPGGINFDAK VRRESFDPTD 350
LFYAHIGGMD AFARGAKIAA AIRADGVLDD FVKDRYSSYD SGVGQEIEDG 400
SANFESLSKY MLDKGEADAN TSGRQEYLEN IINLYV 436
Length:436
Mass (Da):49,032
Last modified:May 3, 2011 - v1
Checksum:iC7F5DE914979E787
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002546 Genomic DNA. Translation: ADY57635.1.
RefSeqiWP_013626379.1. NC_015174.1.
YP_004267657.1. NC_015174.1.

Genome annotation databases

EnsemblBacteriaiADY57635; ADY57635; Plabr_0003.
GeneIDi10237381.
KEGGipbs:Plabr_0003.
PATRICi47008697. VBIPlaBra152897_0004.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002546 Genomic DNA. Translation: ADY57635.1 .
RefSeqi WP_013626379.1. NC_015174.1.
YP_004267657.1. NC_015174.1.

3D structure databases

ProteinModelPortali F0SKL7.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADY57635 ; ADY57635 ; Plabr_0003 .
GeneIDi 10237381.
KEGGi pbs:Plabr_0003.
PATRICi 47008697. VBIPlaBra152897_0004.

Phylogenomic databases

KOi K01805.

Enzyme and pathway databases

BioCyci PBRA756272:GH5Q-3-MONOMER.

Family and domain databases

Gene3Di 3.20.20.150. 1 hit.
HAMAPi MF_00455. Xylose_isom_A.
InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view ]
Pfami PF01261. AP_endonuc_2. 1 hit.
[Graphical view ]
PRINTSi PR00688. XYLOSISMRASE.
SUPFAMi SSF51658. SSF51658. 1 hit.
TIGRFAMsi TIGR02630. xylose_isom_A. 1 hit.
PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448.

Entry informationi

Entry nameiF0SKL7_PLABD
AccessioniPrimary (citable) accession number: F0SKL7
Entry historyi
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: September 3, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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