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F0SKL7

- F0SKL7_PLABD

UniProt

F0SKL7 - F0SKL7_PLABD

Protein

Xylose isomerase

Gene

xylA

Organism
Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 22 (01 Oct 2014)
      Sequence version 1 (03 May 2011)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

    Cofactori

    Binds 2 magnesium ions per subunit.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei100 – 1001UniRule annotation
    Active sitei103 – 1031UniRule annotation
    Metal bindingi231 – 2311Magnesium 1UniRule annotation
    Metal bindingi267 – 2671Magnesium 1UniRule annotation
    Metal bindingi267 – 2671Magnesium 2UniRule annotation
    Metal bindingi270 – 2701Magnesium 2UniRule annotation
    Metal bindingi295 – 2951Magnesium 1UniRule annotation
    Metal bindingi306 – 3061Magnesium 2UniRule annotation
    Metal bindingi308 – 3081Magnesium 2UniRule annotation
    Metal bindingi338 – 3381Magnesium 1UniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. xylose isomerase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. D-xylose metabolic process Source: UniProtKB-HAMAP
    2. pentose-phosphate shunt Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    IsomeraseUniRule annotationSAAS annotationImported

    Keywords - Biological processi

    Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotation, Xylose metabolismUniRule annotationSAAS annotation

    Keywords - Ligandi

    MagnesiumUniRule annotationSAAS annotation, Metal-bindingUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciPBRA756272:GH5Q-3-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
    Gene namesi
    Name:xylAUniRule annotation
    Ordered Locus Names:Plabr_0003Imported
    OrganismiPlanctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448)Imported
    Taxonomic identifieri756272 [NCBI]
    Taxonomic lineageiBacteriaPlanctomycetesPlanctomycetiaPlanctomycetalesPlanctomycetaceaePlanctomyces
    ProteomesiUP000006860: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotationSAAS annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    CytoplasmUniRule annotationSAAS annotation

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotationSAAS annotation

    Structurei

    3D structure databases

    ProteinModelPortaliF0SKL7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the xylose isomerase family.UniRule annotation

    Phylogenomic databases

    KOiK01805.

    Family and domain databases

    Gene3Di3.20.20.150. 1 hit.
    HAMAPiMF_00455. Xylose_isom_A.
    InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013452. Xylose_isom_bac.
    IPR001998. Xylose_isomerase.
    [Graphical view]
    PfamiPF01261. AP_endonuc_2. 1 hit.
    [Graphical view]
    PRINTSiPR00688. XYLOSISMRASE.
    SUPFAMiSSF51658. SSF51658. 1 hit.
    TIGRFAMsiTIGR02630. xylose_isom_A. 1 hit.
    PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F0SKL7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSYFPDVPTI PFEGPESRNP LAFRYYNPDE MIEGQSMRDL LRFSVCYWHT    50
    FRGTGGDPFG PGTAVRPWED GTDSVDMAVK RVDVAFEFIS KLGVDFYCFH 100
    DRDVSPEGSS LKETNGNLDR VVARLKEKQE ETGIKLLWGT ANLFSNPRFM 150
    HGAATSCNAD VFAYAAAQVK KALEVTKELG GQNYVFWGGR EGYQNLFNTD 200
    MKRELDHLAR FMHMAKDYAK SIGFDGQFLF EPKPKEPTKH QYDFDVAACV 250
    NFLRQYGLED TVKMNIETNH ATLAGHSMMH EMEYARIQDM LGSIDANTGD 300
    LLLGWDTDQF PTDIYLTTQC MLVILKQGGL KPGGINFDAK VRRESFDPTD 350
    LFYAHIGGMD AFARGAKIAA AIRADGVLDD FVKDRYSSYD SGVGQEIEDG 400
    SANFESLSKY MLDKGEADAN TSGRQEYLEN IINLYV 436
    Length:436
    Mass (Da):49,032
    Last modified:May 3, 2011 - v1
    Checksum:iC7F5DE914979E787
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002546 Genomic DNA. Translation: ADY57635.1.
    RefSeqiWP_013626379.1. NC_015174.1.
    YP_004267657.1. NC_015174.1.

    Genome annotation databases

    EnsemblBacteriaiADY57635; ADY57635; Plabr_0003.
    GeneIDi10237381.
    KEGGipbs:Plabr_0003.
    PATRICi47008697. VBIPlaBra152897_0004.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002546 Genomic DNA. Translation: ADY57635.1 .
    RefSeqi WP_013626379.1. NC_015174.1.
    YP_004267657.1. NC_015174.1.

    3D structure databases

    ProteinModelPortali F0SKL7.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADY57635 ; ADY57635 ; Plabr_0003 .
    GeneIDi 10237381.
    KEGGi pbs:Plabr_0003.
    PATRICi 47008697. VBIPlaBra152897_0004.

    Phylogenomic databases

    KOi K01805.

    Enzyme and pathway databases

    BioCyci PBRA756272:GH5Q-3-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.150. 1 hit.
    HAMAPi MF_00455. Xylose_isom_A.
    InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013452. Xylose_isom_bac.
    IPR001998. Xylose_isomerase.
    [Graphical view ]
    Pfami PF01261. AP_endonuc_2. 1 hit.
    [Graphical view ]
    PRINTSi PR00688. XYLOSISMRASE.
    SUPFAMi SSF51658. SSF51658. 1 hit.
    TIGRFAMsi TIGR02630. xylose_isom_A. 1 hit.
    PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448Imported.

    Entry informationi

    Entry nameiF0SKL7_PLABD
    AccessioniPrimary (citable) accession number: F0SKL7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 3, 2011
    Last sequence update: May 3, 2011
    Last modified: October 1, 2014
    This is version 22 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3