Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

F0SKL7

- F0SKL7_PLABD

UniProt

F0SKL7 - F0SKL7_PLABD

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Xylose isomerase

Gene

xylA

Organism
Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

Cofactori

Note: Binds 2 magnesium ions per subunit.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei100 – 1001UniRule annotation
Active sitei103 – 1031UniRule annotation
Metal bindingi231 – 2311Magnesium 1UniRule annotation
Metal bindingi267 – 2671Magnesium 1UniRule annotation
Metal bindingi267 – 2671Magnesium 2UniRule annotation
Metal bindingi270 – 2701Magnesium 2UniRule annotation
Metal bindingi295 – 2951Magnesium 1UniRule annotation
Metal bindingi306 – 3061Magnesium 2UniRule annotation
Metal bindingi308 – 3081Magnesium 2UniRule annotation
Metal bindingi338 – 3381Magnesium 1UniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. xylose isomerase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. D-xylose metabolic process Source: UniProtKB-HAMAP
  2. pentose-phosphate shunt Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotation

Keywords - Biological processi

Carbohydrate metabolism, Pentose shuntUniRule annotation, Xylose metabolismUniRule annotation

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotation, Metal-bindingUniRule annotation

Enzyme and pathway databases

BioCyciPBRA756272:GH5Q-3-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
Gene namesi
Name:xylAUniRule annotation
Ordered Locus Names:Plabr_0003Imported
OrganismiPlanctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448)Imported
Taxonomic identifieri756272 [NCBI]
Taxonomic lineageiBacteriaPlanctomycetesPlanctomycetiaPlanctomycetalesPlanctomycetaceaePlanctomyces
ProteomesiUP000006860: Chromosome

Subcellular locationi

Cytoplasm UniRule annotationSAAS annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotation

Interactioni

Subunit structurei

Homotetramer.UniRule annotationSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliF0SKL7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the xylose isomerase family.UniRule annotation

Phylogenomic databases

KOiK01805.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
HAMAPiMF_00455. Xylose_isom_A.
InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamiPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSiPR00688. XYLOSISMRASE.
SUPFAMiSSF51658. SSF51658. 1 hit.
TIGRFAMsiTIGR02630. xylose_isom_A. 1 hit.
PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F0SKL7-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSYFPDVPTI PFEGPESRNP LAFRYYNPDE MIEGQSMRDL LRFSVCYWHT
60 70 80 90 100
FRGTGGDPFG PGTAVRPWED GTDSVDMAVK RVDVAFEFIS KLGVDFYCFH
110 120 130 140 150
DRDVSPEGSS LKETNGNLDR VVARLKEKQE ETGIKLLWGT ANLFSNPRFM
160 170 180 190 200
HGAATSCNAD VFAYAAAQVK KALEVTKELG GQNYVFWGGR EGYQNLFNTD
210 220 230 240 250
MKRELDHLAR FMHMAKDYAK SIGFDGQFLF EPKPKEPTKH QYDFDVAACV
260 270 280 290 300
NFLRQYGLED TVKMNIETNH ATLAGHSMMH EMEYARIQDM LGSIDANTGD
310 320 330 340 350
LLLGWDTDQF PTDIYLTTQC MLVILKQGGL KPGGINFDAK VRRESFDPTD
360 370 380 390 400
LFYAHIGGMD AFARGAKIAA AIRADGVLDD FVKDRYSSYD SGVGQEIEDG
410 420 430
SANFESLSKY MLDKGEADAN TSGRQEYLEN IINLYV
Length:436
Mass (Da):49,032
Last modified:May 3, 2011 - v1
Checksum:iC7F5DE914979E787
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002546 Genomic DNA. Translation: ADY57635.1.
RefSeqiWP_013626379.1. NC_015174.1.
YP_004267657.1. NC_015174.1.

Genome annotation databases

EnsemblBacteriaiADY57635; ADY57635; Plabr_0003.
GeneIDi10237381.
KEGGipbs:Plabr_0003.
PATRICi47008697. VBIPlaBra152897_0004.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002546 Genomic DNA. Translation: ADY57635.1 .
RefSeqi WP_013626379.1. NC_015174.1.
YP_004267657.1. NC_015174.1.

3D structure databases

ProteinModelPortali F0SKL7.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADY57635 ; ADY57635 ; Plabr_0003 .
GeneIDi 10237381.
KEGGi pbs:Plabr_0003.
PATRICi 47008697. VBIPlaBra152897_0004.

Phylogenomic databases

KOi K01805.

Enzyme and pathway databases

BioCyci PBRA756272:GH5Q-3-MONOMER.

Family and domain databases

Gene3Di 3.20.20.150. 1 hit.
HAMAPi MF_00455. Xylose_isom_A.
InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view ]
Pfami PF01261. AP_endonuc_2. 1 hit.
[Graphical view ]
PRINTSi PR00688. XYLOSISMRASE.
SUPFAMi SSF51658. SSF51658. 1 hit.
TIGRFAMsi TIGR02630. xylose_isom_A. 1 hit.
PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448Imported.

Entry informationi

Entry nameiF0SKL7_PLABD
AccessioniPrimary (citable) accession number: F0SKL7
Entry historyi
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: November 26, 2014
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3