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Protein
Submitted name:

Putative ATP-dependent DNA ligase

Gene

Plabr_0882

Organism
Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ligase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciPBRA756272:GH5Q-895-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Plabr_0882Imported
OrganismiPlanctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448)Imported
Taxonomic identifieri756272 [NCBI]
Taxonomic lineageiBacteriaPlanctomycetesPlanctomycetiaPlanctomycetalesPlanctomycetaceaePlanctomyces
ProteomesiUP000006860: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

InterProiIPR014144. LigD_PE_domain.
[Graphical view]
PfamiPF13298. LigD_N. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F0SIB6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSRFVILEHD HPTLHWDLLL DNGEQRVPTW RLTQAPSEQP QLEAGMRFAA
60 70 80 90 100
KAANMEKIDA VKLPDHRRMY FDYEGPVSGD RGQVTRWDAG QYIEIGRQED
110 120 130 140
VRELRLEGVR LRGFAMLVRT ATPDPDNWLF HWVVDELEIE TDEDAAR
Length:147
Mass (Da):17,155
Last modified:May 3, 2011 - v1
Checksum:i04FFC8F21AACF862
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002546 Genomic DNA. Translation: ADY58505.1.
RefSeqiWP_013627245.1. NC_015174.1.
YP_004268527.1. NC_015174.1.

Genome annotation databases

EnsemblBacteriaiADY58505; ADY58505; Plabr_0882.
GeneIDi10238273.
KEGGipbs:Plabr_0882.
PATRICi47010630. VBIPlaBra152897_0959.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002546 Genomic DNA. Translation: ADY58505.1.
RefSeqiWP_013627245.1. NC_015174.1.
YP_004268527.1. NC_015174.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADY58505; ADY58505; Plabr_0882.
GeneIDi10238273.
KEGGipbs:Plabr_0882.
PATRICi47010630. VBIPlaBra152897_0959.

Phylogenomic databases

KOiK01971.

Enzyme and pathway databases

BioCyciPBRA756272:GH5Q-895-MONOMER.

Family and domain databases

InterProiIPR014144. LigD_PE_domain.
[Graphical view]
PfamiPF13298. LigD_N. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448Imported.

Entry informationi

Entry nameiF0SIB6_PLABD
AccessioniPrimary (citable) accession number: F0SIB6
Entry historyi
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: January 7, 2015
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.