F0SCJ3 (F0SCJ3_PEDSD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Acyl-(Acyl-carrier-protein) desaturase EMBL ADY52827.1
EC=1.14.19.2 EMBL ADY52827.1

Gene names

Ordered Locus Names:

Pedsa_2278 EMBL ADY52827.1

Organism

Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) [Complete proteome] [HAMAP] EMBL ADY52827.1

Taxonomic identifier

762903 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Bacteroidetes › Sphingobacteriia › Sphingobacteriales › Sphingobacteriaceae › Pedobacter › Pedobacter saltans

Protein attributes

Sequence length	327 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor

Binds 2 iron ions per subunit By similarity. PIRSR PIRSR000346-1

Ontologies

Keywords
Ligand	Iron PIRSR PIRSR000346-1 Metal-binding PIRSR PIRSR000346-1
Molecular function	Oxidoreductase EMBL ADY52827.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	fatty acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	acyl-[acyl-carrier-protein] desaturase activity Inferred from electronic annotation. Source: EC transition metal ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Metal binding	78	1	Iron 1 By similarity PIRSR PIRSR000346-1
	Metal binding	113	1	Iron 1 By similarity PIRSR PIRSR000346-1
	Metal binding	113	1	Iron 2 By similarity PIRSR PIRSR000346-1
	Metal binding	116	1	Iron 1; via pros nitrogen By similarity PIRSR PIRSR000346-1
	Metal binding	166	1	Iron 2 By similarity PIRSR PIRSR000346-1
	Metal binding	199	1	Iron 1 By similarity PIRSR PIRSR000346-1
	Metal binding	199	1	Iron 2 By similarity PIRSR PIRSR000346-1
	Metal binding	202	1	Iron 2; via pros nitrogen By similarity PIRSR PIRSR000346-1

Sequences

	Sequence		Length	Mass (Da)
	F0SCJ3 [UniParc]. Last modified May 3, 2011. Version 1. Checksum: BFC93C0953533252	FASTA	327	37,439
	10 20 30 40 50 60 MHELSVGSRR EVMTYLEPFM LGEMADYLKP VEEMWQPADF LPDASKDTFF DEVKELQEST 70 80 90 100 110 120 KELSYDLLAV LIGDTITEEA LPTYESWLTM VDDVSKSEQG GWMKWVRAWT AEENRHGDLL 130 140 150 160 170 180 NKYLYLSGRI NMRAMEISTQ YLIQDGFDIG TGADPYRNFI YTSFQEMATN VSHRRVAALA 190 200 210 220 230 240 KKAGDKLLSK MCGVIAADEA RHAKAYKSFI SKAMEVDASQ VMIAFEDMMR KKIVMPAHFL 250 260 270 280 290 300 REIGLKMGET FGHFTDAAQR LGVYTAVDYV DILKELNNDW NIANVTGLDE AGEKARDYLM 310 320 ALPNRLLRVA ERIKVPELEY KFSWIHS

References

[1]

"The complete genome of Pedobacter saltans DSM 12145." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Copeland A., Lapidus A., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Pagani I., Ivanova N., Ovchinnikova G., Lu M., Detter J.C., Han C., Land M., Hauser L., Markowitz V., Cheng J.-F. , Hugenholtz P., Woyke T., Wu D., Tindall B., Pomrenke H.G., Brambilla E., Klenk H.-P., Eisen J.A. Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002545 Genomic DNA. Translation: ADY52827.1.
RefSeq	YP_004274649.1. NC_015177.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADY52827; ADY52827; Pedsa_2278.
GeneID	10231849.
KEGG	psn:Pedsa_2278.
PATRIC	47005373. VBIPedSal163994_2367.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K03921.
OMA	AGMPNFR.
Enzyme and pathway databases
BioCyc	PSAL762903:GHB2-2318-MONOMER.
Family and domain databases
Gene3D	1.10.620.20. 1 hit.
InterPro	IPR005067. Fatty_acid_desaturase-2. IPR009078. Ferritin-like_SF. IPR012348. RNR-rel. [Graphical view]
Pfam	PF03405. FA_desaturase_2. 1 hit. [Graphical view]
PIRSF	PIRSF000346. Dlt9_acylACP_des. 1 hit.
SUPFAM	SSF47240. Ferritin/RR_like. 1 hit.
ProtoNet	Search...

Entry information

Entry name

F0SCJ3_PEDSD

Accession

Primary (citable) accession number: F0SCJ3

Entry history

Integrated into UniProtKB/TrEMBL:	May 3, 2011
Last sequence update:	May 3, 2011
Last modified:	May 1, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)