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F0SB01

- F0SB01_PEDSD

UniProt

F0SB01 - F0SB01_PEDSD

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Protein
Submitted name: 2-dehydro-3-deoxyphosphooctonate aldolase
Gene
Pedsa_1025
Organism
Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

Phosphoenolpyruvate + D-arabinose 5-phosphate + H2O = 2-dehydro-3-deoxy-D-octonate 8-phosphate + phosphate.SAAS annotations

Pathwayi

GO - Molecular functioni

  1. 3-deoxy-8-phosphooctulonate synthase activity Source: UniProtKB-EC
Complete GO annotation...

GO - Biological processi

  1. lipopolysaccharide biosynthetic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

TransferaseSAAS annotationsImported

Keywords - Biological processi

Lipopolysaccharide biosynthesisSAAS annotations

Enzyme and pathway databases

BioCyciPSAL762903:GHB2-1048-MONOMER.
UniPathwayiUPA00030.
UPA00357; UER00474.

Names & Taxonomyi

Protein namesi
Submitted name:
2-dehydro-3-deoxyphosphooctonate aldolaseImported (EC:2.5.1.55Imported)
Gene namesi
Ordered Locus Names:Pedsa_1025Imported
OrganismiPedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643)Imported
Taxonomic identifieri762903 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesSphingobacteriiaSphingobacterialesSphingobacteriaceaePedobacter
ProteomesiUP000000310: Chromosome

Subcellular locationi

Cytoplasm By similarity SAAS annotations

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmSAAS annotations

Family & Domainsi

Phylogenomic databases

KOiK01627.
OMAiSAGSMKF.

Family and domain databases

Gene3Di3.20.20.70. 1 hit.
InterProiIPR013785. Aldolase_TIM.
IPR006218. DAHP1/KDSA.
IPR006269. KDO8P_synthase.
[Graphical view]
PfamiPF00793. DAHP_synth_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR01362. KDO8P_synth. 1 hit.

Sequencei

Sequence statusi: Complete.

F0SB01-1 [UniParc]FASTAAdd to Basket

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MNLDKLKNQD ANNFFLMAGP CAIEGEEIAL RIAEKIVKIT DKLQIPYIFK    50
GSFKKANRSR IDSFTGIGDE KALKILEKVG KEFDVPTVTD IHESSDAAMA 100
AAYVDVLQIP AFLCRQTDLL IAAAETGKFV NIKKGQFLSA GSMKFAVDKI 150
KDSGNNNVIL TDRGNTFGYQ DLIVDFRGIP EMREFNVPVV MDCTHSLQQP 200
NQTSGVTGGK PALIETIAKA AIAVGTDGLF IETHPDPKNA KSDGANMLHL 250
DLLEDLLTKL VKIRRAII 268
Length:268
Mass (Da):29,310
Last modified:May 3, 2011 - v1
Checksum:iEB54D68385950355
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002545 Genomic DNA. Translation: ADY51596.1.
RefSeqiWP_013632095.1. NC_015177.1.
YP_004273418.1. NC_015177.1.

Genome annotation databases

EnsemblBacteriaiADY51596; ADY51596; Pedsa_1025.
GeneIDi10230578.
KEGGipsn:Pedsa_1025.
PATRICi47002720. VBIPedSal163994_1062.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002545 Genomic DNA. Translation: ADY51596.1 .
RefSeqi WP_013632095.1. NC_015177.1.
YP_004273418.1. NC_015177.1.

3D structure databases

ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADY51596 ; ADY51596 ; Pedsa_1025 .
GeneIDi 10230578.
KEGGi psn:Pedsa_1025.
PATRICi 47002720. VBIPedSal163994_1062.

Phylogenomic databases

KOi K01627.
OMAi SAGSMKF.

Enzyme and pathway databases

UniPathwayi UPA00030 .
UPA00357 ; UER00474 .
BioCyci PSAL762903:GHB2-1048-MONOMER.

Family and domain databases

Gene3Di 3.20.20.70. 1 hit.
InterProi IPR013785. Aldolase_TIM.
IPR006218. DAHP1/KDSA.
IPR006269. KDO8P_synthase.
[Graphical view ]
Pfami PF00793. DAHP_synth_1. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR01362. KDO8P_synth. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643.

Entry informationi

Entry nameiF0SB01_PEDSD
AccessioniPrimary (citable) accession number: F0SB01
Entry historyi
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: September 3, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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