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F0SB01 (F0SB01_PEDSD) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length268 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Phosphoenolpyruvate + D-arabinose 5-phosphate + H2O = 2-dehydro-3-deoxy-D-octonate 8-phosphate + phosphate. SAAS SAAS006218

Pathway

Bacterial outer membrane biogenesis; lipopolysaccharide biosynthesis. SAAS SAAS006218

Carbohydrate biosynthesis; 3-deoxy-D-manno-octulosonate biosynthesis; 3-deoxy-D-manno-octulosonate from D-ribulose 5-phosphate: step 2/3. SAAS SAAS006218

Subcellular location

Cytoplasm By similarity SAAS SAAS006218.

Ontologies

Keywords
   Biological processLipopolysaccharide biosynthesis SAAS SAAS006218
   Cellular componentCytoplasm SAAS SAAS006218
   Molecular functionTransferase SAAS SAAS006218 EMBL ADY51596.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processlipopolysaccharide biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-UniPathway

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_function3-deoxy-8-phosphooctulonate synthase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F0SB01 [UniParc].

Last modified May 3, 2011. Version 1.
Checksum: EB54D68385950355

FASTA26829,310
        10         20         30         40         50         60 
MNLDKLKNQD ANNFFLMAGP CAIEGEEIAL RIAEKIVKIT DKLQIPYIFK GSFKKANRSR 

        70         80         90        100        110        120 
IDSFTGIGDE KALKILEKVG KEFDVPTVTD IHESSDAAMA AAYVDVLQIP AFLCRQTDLL 

       130        140        150        160        170        180 
IAAAETGKFV NIKKGQFLSA GSMKFAVDKI KDSGNNNVIL TDRGNTFGYQ DLIVDFRGIP 

       190        200        210        220        230        240 
EMREFNVPVV MDCTHSLQQP NQTSGVTGGK PALIETIAKA AIAVGTDGLF IETHPDPKNA 

       250        260 
KSDGANMLHL DLLEDLLTKL VKIRRAII

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002545 Genomic DNA. Translation: ADY51596.1.
RefSeqYP_004273418.1. NC_015177.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADY51596; ADY51596; Pedsa_1025.
GeneID10230578.
KEGGpsn:Pedsa_1025.
PATRIC47002720. VBIPedSal163994_1062.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01627.
OMANMLRLDL.

Enzyme and pathway databases

BioCycPSAL762903:GHB2-1048-MONOMER.
UniPathwayUPA00030.
UPA00357; UER00474.

Family and domain databases

Gene3D3.20.20.70. 1 hit.
InterProIPR013785. Aldolase_TIM.
IPR006218. DAHP1/KDSA.
IPR006269. KDO8P_synthase.
[Graphical view]
PANTHERPTHR21057:SF2. PTHR21057:SF2. 1 hit.
PfamPF00793. DAHP_synth_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR01362. KDO8P_synth. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF0SB01_PEDSD
AccessionPrimary (citable) accession number: F0SB01
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: May 1, 2013
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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