F0S6Y2 (F0S6Y2_PEDSD) Unreviewed, UniProtKB/TrEMBL
Last modified
May 1, 2013.
Version 13.
History...
Names·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Submitted name: Alpha-glucuronidase EMBL ADY53245.1 EC=3.2.1.139 EMBL ADY53245.1 | ||
| Gene names |
| ||
| Organism | Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) [Complete proteome] [HAMAP] EMBL ADY53245.1 | ||
| Taxonomic identifier | 762903 [NCBI] | ||
| Taxonomic lineage | Bacteria › Bacteroidetes › Sphingobacteriia › Sphingobacteriales › Sphingobacteriaceae › Pedobacter › ![]() |
Protein attributes
| Sequence length | 712 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Predicted |
Ontologies
| Keywords | |
|---|---|
| Domain | Signal EMBL ADY53245.1 |
| Molecular function | Glycosidase EMBL ADY53245.1 Hydrolase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological_process | xylan catabolic process Inferred from electronic annotation. Source: InterPro |
| Cellular_component | extracellular region Inferred from electronic annotation. Source: InterPro |
| Molecular_function | alpha-glucuronidase activity Inferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | |||
Molecule processing | ||||||||
|---|---|---|---|---|---|---|---|---|
| Signal peptide | 1 – 20 | 20 | Potential EMBL ADY53245.1 | |||||
| Chain | 21 – 712 | 692 | Potential | PRO_5000719687 | ||||
Sequences
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References
| [1] | "The complete genome of Pedobacter saltans DSM 12145." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Copeland A., Lapidus A., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Pagani I., Ivanova N., Ovchinnikova G., Lu M., Detter J.C., Han C., Land M., Hauser L., Markowitz V., Cheng J.-F. Eisen J.A.Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP002545 Genomic DNA. Translation: ADY53245.1. |
| RefSeq | YP_004275067.1. NC_015177.1. |
3D structure databases | |
| ModBase | Search... |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblBacteria | ADY53245; ADY53245; Pedsa_2703. |
| GeneID | 10232292. |
| KEGG | psn:Pedsa_2703. |
| PATRIC | 47006287. VBIPedSal163994_2807. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| KO | K01235. |
| OMA | ITQEYLG. |
Enzyme and pathway databases | |
| BioCyc | PSAL762903:GHB2-2761-MONOMER. |
Family and domain databases | |
| Gene3D | 3.20.20.80. 1 hit. 3.90.1330.10. 1 hit. |
| InterPro | IPR011395. Glyco_hydro_67_aGlcAse. IPR005154. Glyco_hydro_67_aGlcAse_N. IPR011099. Glyco_hydro_67_C. IPR011100. Glyco_hydro_67_M. IPR013781. Glyco_hydro_catalytic_dom. IPR017853. Glycoside_hydrolase_SF. [Graphical view] |
| Pfam | PF07477. Glyco_hydro_67C. 1 hit. PF07488. Glyco_hydro_67M. 1 hit. PF03648. Glyco_hydro_67N. 1 hit. [Graphical view] |
| PIRSF | PIRSF029900. Alpha-glucuronds. 1 hit. |
| SUPFAM | SSF51445. Glyco_hydro_cat. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | F0S6Y2_PEDSD | ||||||||
| Accession | Primary (citable) accession number: F0S6Y2 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with
