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Protein
Submitted name:

ABC-type transporter, integral membrane subunit

Gene

SpiBuddy_0521

Organism
Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) (Spirochaeta sp. (strain Buddy))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
ABC-type transporter, integral membrane subunitImported
Gene namesi
Ordered Locus Names:SpiBuddy_0521Imported
OrganismiSphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) (Spirochaeta sp. (strain Buddy))Imported
Taxonomic identifieri158189 [NCBI]
Taxonomic lineageiBacteriaSpirochaetesSpirochaetalesSpirochaetaceaeSphaerochaeta
Proteomesi
  • UP000008466 Componenti: Chromosome

Subcellular locationi

  • Cell membrane UniRule annotation; Multi-pass membrane protein UniRule annotation

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei15 – 35HelicalUniRule annotationAdd BLAST21
Transmembranei80 – 102HelicalUniRule annotationAdd BLAST23
Transmembranei108 – 128HelicalUniRule annotationAdd BLAST21
Transmembranei140 – 163HelicalUniRule annotationAdd BLAST24
Transmembranei200 – 219HelicalUniRule annotationAdd BLAST20
Transmembranei240 – 263HelicalUniRule annotationAdd BLAST24

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi158189.SpiBuddy_0521.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini72 – 263ABC transmembrane type-1InterPro annotationAdd BLAST192

Sequence similaritiesi

Belongs to the binding-protein-dependent transport system permease family.UniRule annotation
Contains 1 ABC transmembrane type-1 domain.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixUniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG4105FBH. Bacteria.
ENOG410XQ2F. LUCA.
KOiK10119.
OMAiKSIANDY.
OrthoDBiPOG091H045X.

Family and domain databases

CDDicd06261. TM_PBP2. 1 hit.
Gene3Di1.10.3720.10. 1 hit.
InterProiIPR000515. MetI-like.
[Graphical view]
PfamiPF00528. BPD_transp_1. 1 hit.
[Graphical view]
SUPFAMiSSF161098. SSF161098. 1 hit.
PROSITEiPS50928. ABC_TM1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F0RUJ2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKEHASDKL FKAGIYLFCI VVLILTGFPL LFLVFNSFKS LPEYMMNIWQ
60 70 80 90 100
PPKKLFLGNY KLVFAPTFLR YFINSLIVSA SGVTLVILVS SLMAFVFAKF
110 120 130 140 150
SFKVTKGIFF LVVAGMMIPI HTTLIPIYSL SINIGVYDTL FALIGPYISF
160 170 180 190 200
NIPVSVFIMT QFFKEMPKEL DEAAKIDGGS LFLIYRKIVM PLSGPAVSTV
210 220 230 240 250
GVYTFLTMWN EFVYALVMID TRSKKTLSLG IRDFYGFQTI NIPAVLTAIL
260 270
VGSLPVLIFY FVAQDKVING LTQGALKG
Length:278
Mass (Da):31,100
Last modified:May 3, 2011 - v1
Checksum:i35F44780E94D1A8E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002541 Genomic DNA. Translation: ADY12354.1.
RefSeqiWP_013606207.1. NC_015152.1.

Genome annotation databases

EnsemblBacteriaiADY12354; ADY12354; SpiBuddy_0521.
KEGGisbu:SpiBuddy_0521.
PATRICi47020323. VBISpiSp132844_0537.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002541 Genomic DNA. Translation: ADY12354.1.
RefSeqiWP_013606207.1. NC_015152.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi158189.SpiBuddy_0521.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADY12354; ADY12354; SpiBuddy_0521.
KEGGisbu:SpiBuddy_0521.
PATRICi47020323. VBISpiSp132844_0537.

Phylogenomic databases

eggNOGiENOG4105FBH. Bacteria.
ENOG410XQ2F. LUCA.
KOiK10119.
OMAiKSIANDY.
OrthoDBiPOG091H045X.

Family and domain databases

CDDicd06261. TM_PBP2. 1 hit.
Gene3Di1.10.3720.10. 1 hit.
InterProiIPR000515. MetI-like.
[Graphical view]
PfamiPF00528. BPD_transp_1. 1 hit.
[Graphical view]
SUPFAMiSSF161098. SSF161098. 1 hit.
PROSITEiPS50928. ABC_TM1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiF0RUJ2_SPHGB
AccessioniPrimary (citable) accession number: F0RUJ2
Entry historyi
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: November 30, 2016
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.