F0RMM2 (F0RMM2_DEIPM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Pseudouridine synthase EMBL ADY26072.1

Gene names

Ordered Locus Names:

Deipr_0916 EMBL ADY26072.1

Organism

Deinococcus proteolyticus (strain ATCC 35074 / DSM 20540 / JCM 6276 / NBRC 101906 / NCIMB 13154 / VKM Ac-1939 / CCM 2703) [Complete proteome] [HAMAP] EMBL ADY26072.1

Taxonomic identifier

693977 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Deinococcus-Thermus › Deinococci › Deinococcales › Deinococcaceae › Deinococcus › Deinococcus proteolyticus

Protein attributes

Sequence length	253 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	pseudouridine synthesis Inferred from electronic annotation. Source: InterPro
Molecular_function	RNA binding Inferred from electronic annotation. Source: InterPro pseudouridine synthase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F0RMM2 [UniParc]. Last modified May 3, 2011. Version 1. Checksum: 82377D1A9CCB27CF	FASTA	253	28,326
	10 20 30 40 50 60 MGAEPLQAGR GRPRLLLEHP DFYALHKPAL WLTHPVRSHG SSRVPDVVSF WQSETGESSL 70 80 90 100 110 120 GPPHRLDRET SGLLLLSRDS ESARRFFVLF GQRLVAKTYR AIVRGVPAWT DYELDAPLGE 130 140 150 160 170 180 LGLGGGNRVI MRQGVVPDGR PAVTAFRVLE RRAGHTLIEA RPRTGRLHQI RAHLYHLGLP 190 200 210 220 230 240 LVGDKIYGPE RDAFLEFRET GQTPELTRRL GMARQALHAA SLHFPWDGAQ VRLHDPLPAD 250 MQAFWDGLEQ AGR

References

[1]

"The complete sequence of chromosome of Deinococcus proteolyticus DSM 20540." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Copeland A., Lapidus A., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Pagani I., Ivanova N., Ovchinnikova G., Zeytun A., Detter J.C., Han C., Land M., Hauser L., Markowitz V., Cheng J.-F. , Hugenholtz P., Woyke T., Wu D., Pukall R., Steenblock K., Brambilla E., Klenk H.-P., Eisen J.A. Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 35074 / DSM 20540 / JCM 6276 / NBRC 101906 / NCIMB 13154 / VKM Ac-1939 / CCM 2703.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002536 Genomic DNA. Translation: ADY26072.1.
RefSeq	YP_004255689.1. NC_015161.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADY26072; ADY26072; Deipr_0916.
GeneID	10256395.
KEGG	dpt:Deipr_0916.
PATRIC	46929618. VBIDeiPro159979_0906.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K06180.
Family and domain databases
InterPro	IPR020103. PsdUridine_synth_cat_dom. IPR006145. PsdUridine_synth_RsuA/RluD. [Graphical view]
Pfam	PF00849. PseudoU_synth_2. 1 hit. [Graphical view]
SUPFAM	SSF55120. PsdUridine_synth_cat_dom. 1 hit.
ProtoNet	Search...

Entry information

Entry name

F0RMM2_DEIPM

Accession

Primary (citable) accession number: F0RMM2

Entry history

Integrated into UniProtKB/TrEMBL:	May 3, 2011
Last sequence update:	May 3, 2011
Last modified:	May 1, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)