F0RH27 (F0RH27_CELLC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ornithine aminotransferase EMBL ADY28065.1
EC=2.6.1.13 EMBL ADY28065.1

Gene names

Ordered Locus Names:

Celly_0230

Organism

Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20) [Complete proteome] [HAMAP] EMBL ADY28065.1

Taxonomic identifier

867900 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Cellulophaga › Cellulophaga lytica

Protein attributes

Sequence length	426 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003560

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU003560
Molecular function	Aminotransferase EMBL ADY28065.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	metabolic process Inferred from electronic annotation. Source: GOC
Molecular_function	ornithine-oxo-acid transaminase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F0RH27 [UniParc]. Last modified May 3, 2011. Version 1. Checksum: F8AD5C70DFA43F11	FASTA	426	45,994
	10 20 30 40 50 60 MSIIQGSASA DAIALEEKHG AHNYHPLPVV LNKGEGVYVW DVEGKKYYDF LSAYSAVNQG 70 80 90 100 110 120 HCHPKIVGAM VNQAQTLTLT SRAFYNDMLG KFEKFATETF NYDKLLPMNT GAEAVETALK 130 140 150 160 170 180 LCRKWAYEVK GIPENEAEII VCENNFHGRT TTIISFSNDP VARKNFGPYT SGFIKIEYDN 190 200 210 220 230 240 LVALEAALEN NKNVAGFLVE PIQGEAGVYV PSEGYLAAAK ALCKKHNVLF IADEVQTGIA 250 260 270 280 290 300 RTGRLLATCG NCTCADKNCS GTPEVKADIL ILGKALSGGS YPVSGVLANN DIMNVITPGN 310 320 330 340 350 360 HGSTFGGNPV AAAIGIAALE VVRDEKLAEN AQVLGELFRE ELGKFIETSD LVTLVRGKGL 370 380 390 400 410 420 LNAIIINDTE DSSTAWDICM ALKENGLLAK PTHGNIIRFA PPLVMTKEQL LECVAIITKT LSEFKK

References

[1]

"Complete genome sequence of Cellulophaga lytica type strain (LIM-21)." Pati A., Abt B., Teshima H., Lu M., Misra M., Nolan M., Lapidus A., Lucas S., Hammon N., Deshpande S., Cheng J., Tapia R., Han C., Goodwin L., Pitluck S., Liolios K., Pagani I., Mavromatis K. , Ovchinikova G., Chen A., Palaniappan K., Land M., Hauser L., Jeffries C., Detter J., Brambilla E., Kannan P., Rohde M., Spring S., Goker M., Woyke T., Bristow J., Eisen J., Markowitz V., Hugenholtz P., Kyrpides N., Klenk H., Ivanova N. Stand. Genomic Sci. 4:221-232(2011) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002534 Genomic DNA. Translation: ADY28065.1.
RefSeq	YP_004260936.1. NC_015167.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADY28065; ADY28065; Celly_0230.
GeneID	10262214.
KEGG	cly:Celly_0230.
PATRIC	46914691. VBICelLyt164863_0234.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K00819.
Enzyme and pathway databases
BioCyc	CLYT867900:GHJM-230-MONOMER.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 2 hits.
InterPro	IPR005814. Aminotrans_3. IPR010164. Orn_aminotrans. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
PANTHER	PTHR11986. PTHR11986. 1 hit. PTHR11986:SF18. PTHR11986:SF18. 1 hit.
Pfam	PF00202. Aminotran_3. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01885. Orn_aminotrans. 1 hit.
ProtoNet	Search...

Entry information

Entry name

F0RH27_CELLC

Accession

Primary (citable) accession number: F0RH27

Entry history

Integrated into UniProtKB/TrEMBL:	May 3, 2011
Last sequence update:	May 3, 2011
Last modified:	May 1, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)