Celly_1820

Functionⁱ

Enzyme and pathway databases

BioCycⁱ	CLYT867900:GHJM-1853-MONOMER.

BioCycⁱ

CLYT867900:GHJM-1853-MONOMER.

Names & Taxonomyⁱ

Protein namesⁱ	Submitted name: 2-oxoglutarate dehydrogenase, E1 subunitImported Automatic assertion inferred from database entriesⁱ EMBL:ADY29643.1 (EC:1.2.4.2Imported Automatic assertion inferred from database entriesⁱ EMBL:ADY29643.1 )
Gene namesⁱ	Ordered Locus Names:Celly_1820Imported Automatic assertion inferred from database entriesⁱ EMBL:ADY29643.1
Organismⁱ	Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20)Imported Automatic assertion inferred from database entriesⁱ EMBL:ADY29643.1 Proteomes:UP000007487
Taxonomic identifierⁱ	867900 [NCBI]
Taxonomic lineageⁱ	cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Cellulophaga › Cellulophaga lytica
Proteomesⁱ	UP000007487: Chromosome

Structureⁱ

3D structure databases

ProteinModelPortalⁱ	F0RC09.
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Family & Domainsⁱ

Phylogenomic databases

KOⁱ	K00164.

KOⁱ

K00164.

Family and domain databases

Gene3Dⁱ	3.40.50.970. 2 hits.
InterProⁱ	IPR011603. 2oxoglutarate_DH_E1. IPR001017. DH_E1. IPR029061. THDP-binding. IPR005475. Transketolase-like_Pyr-bd. [Graphical view]
PANTHERⁱ	PTHR23152. PTHR23152. 1 hit.
Pfamⁱ	PF00676. E1_dh. 1 hit. PF02779. Transket_pyr. 1 hit. [Graphical view]
PIRSFⁱ	PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTⁱ	SM00861. Transket_pyr. 1 hit. [Graphical view]
SUPFAMⁱ	SSF52518. SSF52518. 2 hits.
TIGRFAMsⁱ	TIGR00239. 2oxo_dh_E1. 1 hit.

Sequenceⁱ

Sequence statusⁱ: Complete.

F0RC09-1 [UniParc]FASTA Add to Basket

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        10         20         30         40         50
MDKYSFLNAA HTSFFATLYD KYLISPDSVE PSWRAFFQGF DFGQETAQEE 
        60         70         80         90        100
FSENGPAIEA AMPQSLQKEF KVIKLIDGYR SRGHLFTKTN PVRERRKYSP 
       110        120        130        140        150
TLELDNFGLS SEDLNTVFTA GEILGIGAVS LEEIIKHLKS IYCDAIGVEY 
       160        170        180        190        200
MYIRKPERVE WIQNWLNVND NHPKFNADRK KHILKKLNQA VSFESFLHTK 
       210        220        230        240        250
YVGQKRFSIE GNESLIPALD AVVERAAEMG VEQFVMGMAH RGRLNVLTNI 
       260        270        280        290        300
FGKAAKDIFS EFDGKDYEQE IFDGDVKYHL GWTSERKASN GNKIKMNIAP 
       310        320        330        340        350
NPSHLETVGA VVEGIARVKQ DAHFPEDFSK VLPIVVHGDA AIAGQGLVYE 
       360        370        380        390        400
VVQMANLDGY KTNGTIHIVV NNQIGFTTNY LDARSSTYCT DVAKVTLSPV 
       410        420        430        440        450
LHVNADDAEA VVHASLFALE YRMRFNRDVF IDLLGYRKYG HNEGDEPRFT 
       460        470        480        490        500
QPKLYKAISK HNNSRDIYAE RLLAEGVIEK GFVKELENEY KASLEEELED 
       510        520        530        540        550
SRKEDKTVIT PFMADEWSGF ASVREWEMME AVDTTYDKDK LTEIAKVITE 
       560        570        580        590        600
LPSDKKFLRK VEKLVKDRKK MFFETNKLDW AMGELLAYGT LLQEGFGVRM 
       610        620        630        640        650
SGQDVERGTF SHRHAVMKVE ESEEEIILLN HLSEEQARFQ IYNSLLSEYG 
       660        670        680        690        700
VVGFDYGYAM ASPKTLTIWE AQFGDFSNGA QIMLDQYISA AEDKWKLQNG 
       710        720        730        740        750
LVMLLPHGYE GQGAEHSSAR MERYLQLCAR DNMYIADVST PAQMFHILRR 
       760        770        780        790        800
QMKVNFRKPL VIFTPKSLLR HPKAVSTIDE LANGTFQEVL DDTTADVSKV 
       810        820        830        840        850
KSLVFCTGKF YYDLLAEKEE QNREDVALVR VEQLFPLPTE KITEIIGRYT 
       860        870        880        890        900
NADDIVWAQE EPRNMGAWSH IMMHYKDANK LRVASRRFYA SPAAGSAVRS 
       910        920 
KRRHQQVIDY VFDKTKDNMT KR

Length:922

Mass (Da):105,372

Last modified:May 3, 2011 - v1

Checksum:ⁱ8F6C8DF971067824

GO

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	CP002534 Genomic DNA. Translation: ADY29643.1.
RefSeqⁱ	YP_004262514.1. NC_015167.1.

Genome annotation databases

EnsemblBacteriaⁱ	ADY29643; ADY29643; Celly_1820.
GeneIDⁱ	10263837.
KEGGⁱ	cly:Celly_1820.
PATRICⁱ	46917923. VBICelLyt164863_1816.

Cross-referencesⁱ

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	CP002534 Genomic DNA. Translation: ADY29643.1.
RefSeqⁱ	YP_004262514.1. NC_015167.1.

3D structure databases

ProteinModelPortalⁱ	F0RC09.
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Protocols and materials databases

Structural Biology Knowledgebase	Search...

Structural Biology Knowledgebase

Search...

Genome annotation databases

EnsemblBacteriaⁱ	ADY29643; ADY29643; Celly_1820.
GeneIDⁱ	10263837.
KEGGⁱ	cly:Celly_1820.
PATRICⁱ	46917923. VBICelLyt164863_1816.

Phylogenomic databases

KOⁱ	K00164.

KOⁱ

K00164.

Enzyme and pathway databases

BioCycⁱ	CLYT867900:GHJM-1853-MONOMER.

BioCycⁱ

CLYT867900:GHJM-1853-MONOMER.

Family and domain databases

Gene3Dⁱ	3.40.50.970. 2 hits.
InterProⁱ	IPR011603. 2oxoglutarate_DH_E1. IPR001017. DH_E1. IPR029061. THDP-binding. IPR005475. Transketolase-like_Pyr-bd. [Graphical view]
PANTHERⁱ	PTHR23152. PTHR23152. 1 hit.
Pfamⁱ	PF00676. E1_dh. 1 hit. PF02779. Transket_pyr. 1 hit. [Graphical view]
PIRSFⁱ	PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTⁱ	SM00861. Transket_pyr. 1 hit. [Graphical view]
SUPFAMⁱ	SSF52518. SSF52518. 2 hits.
TIGRFAMsⁱ	TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNetⁱ	Search...

Publicationsⁱ

"Complete genome sequence of Cellulophaga lytica type strain (LIM-21)."
Pati A., Abt B., Teshima H., Nolan M., Lapidus A., Lucas S., Hammon N., Deshpande S., Cheng J.F., Tapia R., Han C., Goodwin L., Pitluck S., Liolios K., Pagani I., Mavromatis K., Ovchinikova G., Chen A.
Ivanova N.
Stand. Genomic Sci. 4:221-232(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain:
ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20
Imported
Automatic assertion inferred from database entriesⁱ
- Proteomes:UP000007487
.

Entry informationⁱ

Entry nameⁱ

F0RC09_CELLC

Accessionⁱ

Primary (citable) accession number: F0RC09

Entry historyⁱ

Integrated into UniProtKB/TrEMBL:	May 3, 2011
Last sequence update:	May 3, 2011
Last modified:	January 7, 2015
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry statusⁱ

Unreviewed (UniProtKB/TrEMBL)

Miscellaneousⁱ

Keywords - Technical termⁱ

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsⁱ

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:

100%	UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%	UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%	UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

F0RC09 - F0RC09_CELLC

UniProt

F0RC09 - F0RC09_CELLC

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2-oxoglutarate dehydrogenase, E1 subunit

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Functionⁱ

GO - Molecular functionⁱ

GO - Biological processⁱ

Keywords - Molecular functionⁱ

Enzyme and pathway databases

Names & Taxonomyⁱ

Structureⁱ

3D structure databases

Family & Domainsⁱ

Phylogenomic databases

Family and domain databases

Sequenceⁱ

Sequence databases

Genome annotation databases

Cross-referencesⁱ

Sequence databases

3D structure databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Enzyme and pathway databases

Family and domain databases

Publicationsⁱ

Entry informationⁱ

Miscellaneousⁱ

Keywords - Technical termⁱ

External Data

Similar proteinsⁱ

UniProtKB

Proteomes

UniRef

Supporting data

UniParc

Help

F0RC09 - F0RC09_CELLC

UniProt

F0RC09 - F0RC09_CELLC

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2-oxoglutarate dehydrogenase, E1 subunit

Celly_1820

Select a section on the left to see content.

<p>Provides any useful information about the protein, mostly biological knowledge.</p><p><a href='../manual/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:</p><p><a href='../manual/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:</p><p><a href='../manual/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

Enzyme and pathway databases

<p>Provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.</p><p><a href='../manual/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>Provides information on the tertiary structure of a protein.</p><p><a href='../manual/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

<p>Provides information on sequence similarities with other proteins and the domain(s) present in a protein.</p><p><a href='../manual/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Phylogenomic databases

Family and domain databases

<p>Displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including length and molecular weight.</p><p><a href='../manual/sequences_section' target='_top'>More...</a></p>Sequencei

Sequence databases

Genome annotation databases

<p>Is used to point to information related to entries and found in data collections other than UniProtKB.</p><p><a href='../manual/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

3D structure databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Enzyme and pathway databases

Family and domain databases

<p>Contains the literature citations that are the sources of data used to annotate the entry. Each reference is numbered and contains several subsections allowing a precise description of a given citation.</p><p><a href='../manual/publications_section' target='_top'>More...</a></p>Publicationsi

<p>Provides general information on the entry.</p><p><a href='../manual/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>Contains any relevant information that doesn’t fit in any other defined sections</p><p><a href='../manual/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

External Data

Functionⁱ

GO - Molecular functionⁱ

GO - Biological processⁱ

Names & Taxonomyⁱ

Structureⁱ

Family & Domainsⁱ

Sequenceⁱ

Cross-referencesⁱ

Publicationsⁱ

Entry informationⁱ

Miscellaneousⁱ