F0RC09 (F0RC09_CELLC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
2-oxoglutarate dehydrogenase, E1 subunit EMBL ADY29643.1
EC=1.2.4.2 EMBL ADY29643.1

Gene names

Ordered Locus Names:

Celly_1820

Organism

Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20) [Complete proteome] [HAMAP] EMBL ADY29643.1

Taxonomic identifier

867900 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Cellulophaga › Cellulophaga lytica

Protein attributes

Sequence length	922 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Oxidoreductase EMBL ADY29643.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Molecular_function	oxoglutarate dehydrogenase (succinyl-transferring) activity Inferred from electronic annotation. Source: EC thiamine pyrophosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F0RC09 [UniParc]. Last modified May 3, 2011. Version 1. Checksum: 8F6C8DF971067824	FASTA	922	105,372
	10 20 30 40 50 60 MDKYSFLNAA HTSFFATLYD KYLISPDSVE PSWRAFFQGF DFGQETAQEE FSENGPAIEA 70 80 90 100 110 120 AMPQSLQKEF KVIKLIDGYR SRGHLFTKTN PVRERRKYSP TLELDNFGLS SEDLNTVFTA 130 140 150 160 170 180 GEILGIGAVS LEEIIKHLKS IYCDAIGVEY MYIRKPERVE WIQNWLNVND NHPKFNADRK 190 200 210 220 230 240 KHILKKLNQA VSFESFLHTK YVGQKRFSIE GNESLIPALD AVVERAAEMG VEQFVMGMAH 250 260 270 280 290 300 RGRLNVLTNI FGKAAKDIFS EFDGKDYEQE IFDGDVKYHL GWTSERKASN GNKIKMNIAP 310 320 330 340 350 360 NPSHLETVGA VVEGIARVKQ DAHFPEDFSK VLPIVVHGDA AIAGQGLVYE VVQMANLDGY 370 380 390 400 410 420 KTNGTIHIVV NNQIGFTTNY LDARSSTYCT DVAKVTLSPV LHVNADDAEA VVHASLFALE 430 440 450 460 470 480 YRMRFNRDVF IDLLGYRKYG HNEGDEPRFT QPKLYKAISK HNNSRDIYAE RLLAEGVIEK 490 500 510 520 530 540 GFVKELENEY KASLEEELED SRKEDKTVIT PFMADEWSGF ASVREWEMME AVDTTYDKDK 550 560 570 580 590 600 LTEIAKVITE LPSDKKFLRK VEKLVKDRKK MFFETNKLDW AMGELLAYGT LLQEGFGVRM 610 620 630 640 650 660 SGQDVERGTF SHRHAVMKVE ESEEEIILLN HLSEEQARFQ IYNSLLSEYG VVGFDYGYAM 670 680 690 700 710 720 ASPKTLTIWE AQFGDFSNGA QIMLDQYISA AEDKWKLQNG LVMLLPHGYE GQGAEHSSAR 730 740 750 760 770 780 MERYLQLCAR DNMYIADVST PAQMFHILRR QMKVNFRKPL VIFTPKSLLR HPKAVSTIDE 790 800 810 820 830 840 LANGTFQEVL DDTTADVSKV KSLVFCTGKF YYDLLAEKEE QNREDVALVR VEQLFPLPTE 850 860 870 880 890 900 KITEIIGRYT NADDIVWAQE EPRNMGAWSH IMMHYKDANK LRVASRRFYA SPAAGSAVRS 910 920 KRRHQQVIDY VFDKTKDNMT KR

References

[1]

"Complete genome sequence of Cellulophaga lytica type strain (LIM-21)." Pati A., Abt B., Teshima H., Lu M., Misra M., Nolan M., Lapidus A., Lucas S., Hammon N., Deshpande S., Cheng J., Tapia R., Han C., Goodwin L., Pitluck S., Liolios K., Pagani I., Mavromatis K. , Ovchinikova G., Chen A., Palaniappan K., Land M., Hauser L., Jeffries C., Detter J., Brambilla E., Kannan P., Rohde M., Spring S., Goker M., Woyke T., Bristow J., Eisen J., Markowitz V., Hugenholtz P., Kyrpides N., Klenk H., Ivanova N. Stand. Genomic Sci. 4:221-232(2011) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002534 Genomic DNA. Translation: ADY29643.1.
RefSeq	YP_004262514.1. NC_015167.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADY29643; ADY29643; Celly_1820.
GeneID	10263837.
KEGG	cly:Celly_1820.
PATRIC	46917923. VBICelLyt164863_1816.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K00164.
Enzyme and pathway databases
BioCyc	CLYT867900:GHJM-1853-MONOMER.
Family and domain databases
InterPro	IPR011603. 2oxoglutarate_DH_E1. IPR001017. DH_E1. IPR005475. Transketolase-like_Pyr-bd. [Graphical view]
PANTHER	PTHR23152. PTHR23152. 1 hit.
Pfam	PF00676. E1_dh. 1 hit. PF02779. Transket_pyr. 1 hit. [Graphical view]
PIRSF	PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMART	SM00861. Transket_pyr. 1 hit. [Graphical view]
TIGRFAMs	TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNet	Search...

Entry information

Entry name

F0RC09_CELLC

Accession

Primary (citable) accession number: F0RC09

Entry history

Integrated into UniProtKB/TrEMBL:	May 3, 2011
Last sequence update:	May 3, 2011
Last modified:	May 1, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)