F0RBZ1 (F0RBZ1_CELLC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycoside hydrolase family 2 TIM barrel EMBL ADY29625.1

Gene names

Ordered Locus Names:

Celly_1802

Organism

Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20) [Complete proteome] [HAMAP] EMBL ADY29625.1

Taxonomic identifier

867900 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Cellulophaga › Cellulophaga lytica

Protein attributes

Sequence length	1076 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. SAAS SAAS013812

Ontologies

Keywords
Domain	Signal EMBL ADY29625.1
Molecular function	Glycosidase SAAS SAAS023230 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Cellular_component	beta-galactosidase complex Inferred from electronic annotation. Source: InterPro
Molecular_function	beta-galactosidase activity Inferred from electronic annotation. Source: InterPro carbohydrate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 20	20	Potential EMBL ADY29625.1
	Chain	21 – 1076	1056	Potential EMBL ADY29625.1		PRO_5000717357

Sequences

	Sequence		Length	Mass (Da)
	F0RBZ1 [UniParc]. Last modified May 3, 2011. Version 1. Checksum: 4CC3FA34A1C6C215	FASTA	1,076	122,674
	10 20 30 40 50 60 MRHGLTIALL FFIVAQSVTA QNDWENEHIF GINKMEARVA SYSYKNSTDA LEGDRNKARV 70 80 90 100 110 120 KSLNGIWKFK YTAKSTDRPT DFYAANFKGE DFANIPVPSN WELQGHGQPI YTNITYPFTP 130 140 150 160 170 180 NIQDPNLKYG WRGPQPPIPP KIYRDNPVGS YYRDFKIPEE WKNQSVILHF GGISSAFYVW 190 200 210 220 230 240 VNGKKVGYSQ DSRLAAEFDI SAYINPNTTN RVAVQVFRWS DGSYLENQDM WRLSGIHREV 250 260 270 280 290 300 LLLAQPKIAI NDFYIKTKFD ANIEDAKLQI RPKVWIKENK TNLQNWTITA MLFNADKKEV 310 320 330 340 350 360 LDKEISVPVS TVFNERWPAR DITKFGLLEA NIRMPNKWSA ENPYLYTVVL NVKDPNGKIV 370 380 390 400 410 420 ESRSQKIGFR KVEFSKKNEL LINGKVVKLM GVNRHDHHPT RGKALTREDL RKDVALIKQY 430 440 450 460 470 480 NFNAVRTSHY PNDPYFIELC NEYGIYVMSE ANIETHHLGS YIPQTPSWTA PILSRVYRMV 490 500 510 520 530 540 ERDKNNPSII SWSLGNESGT GPAFAAAAAW IKDYDSSRFI HYEGAQGAPN NPAYIENAGF 550 560 570 580 590 600 TSNNWPSMAN PTDPAYVDVI SRMYPDHEQL INLANSPHIN RPIVMCEYMH AMGNSMGGLG 610 620 630 640 650 660 EFWDIIRAKP NLIGGFIWDM VDQGLEKKDP NGNIFYAYGG DFGDVPNDHN FCINGVFASD 670 680 690 700 710 720 RTPNPHAWEA KYVFQPVAFE AVDLANKKVR IINRFTTTNL DKYTIKWSVF ENGKELESGE 730 740 750 760 770 780 LDSQDIAASS SAIVTIPFKS NNLKSNSDYW LRLSAHEKTD RLWAKKGYLI AKEQLNIKTK 790 800 810 820 830 840 KATSTYTSSS NNHITTLETD KTITVKGTKF SVSISKENGQ LASYKTEGKE QVISPLKPNF 850 860 870 880 890 900 YRPPVDNDIR GASNKVLKKG RQFWKNIIDS VKTTKVTISK KHEKFIEITS EQYISKKLSF 910 920 930 940 950 960 KTSFTVYNDA TVLISFSTQA SKSLPAPIRI GLTMGVSKQL KNTSYYGNGP YENYSDRKRN 970 980 990 1000 1010 1020 SEIGEYHTKT DAMFTNYVMP QENGNRTETR WLKLTNNKKS GIAIIAMSEF SFSVWPYSSE 1030 1040 1050 1060 1070 NIEQAKHPYE LTPQNYYTLN IDYAQTGLGG TLSHLLPKYT LKSGEYNFQF LIQPLQ

References

[1]

"Complete genome sequence of Cellulophaga lytica type strain (LIM-21)." Pati A., Abt B., Teshima H., Lu M., Misra M., Nolan M., Lapidus A., Lucas S., Hammon N., Deshpande S., Cheng J., Tapia R., Han C., Goodwin L., Pitluck S., Liolios K., Pagani I., Mavromatis K. , Ovchinikova G., Chen A., Palaniappan K., Land M., Hauser L., Jeffries C., Detter J., Brambilla E., Kannan P., Rohde M., Spring S., Goker M., Woyke T., Bristow J., Eisen J., Markowitz V., Hugenholtz P., Kyrpides N., Klenk H., Ivanova N. Stand. Genomic Sci. 4:221-232(2011) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002534 Genomic DNA. Translation: ADY29625.1.
RefSeq	YP_004262496.1. NC_015167.1.
3D structure databases
ProteinModelPortal	F0RBZ1.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADY29625; ADY29625; Celly_1802.
GeneID	10263819.
KEGG	cly:Celly_1802.
PATRIC	46917887. VBICelLyt164863_1798.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01190.
Enzyme and pathway databases
BioCyc	CLYT867900:GHJM-1835-MONOMER.
Family and domain databases
Gene3D	2.60.40.320. 2 hits. 2.70.98.10. 1 hit. 3.20.20.80. 1 hit.
InterPro	IPR004199. B-gal_small/dom_5. IPR011013. Gal_mutarotase_SF_dom. IPR008979. Galactose-bd-like. IPR014718. Glyco_hydro-type_carb-bd_sub. IPR006101. Glyco_hydro_2. IPR013812. Glyco_hydro_2/20_Ig-like. IPR023230. Glyco_hydro_2_CS. IPR006102. Glyco_hydro_2_Ig-like. IPR006104. Glyco_hydro_2_N. IPR006103. Glyco_hydro_2_TIM. IPR013781. Glyco_hydro_catalytic_dom. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Pfam	PF02929. Bgal_small_N. 1 hit. PF00703. Glyco_hydro_2. 1 hit. PF02836. Glyco_hydro_2_C. 1 hit. PF02837. Glyco_hydro_2_N. 1 hit. [Graphical view]
PRINTS	PR00132. GLHYDRLASE2.
SMART	SM01038. Bgal_small_N. 1 hit. [Graphical view]
SUPFAM	SSF49785. Gal_bind_like. 1 hit. SSF74650. Gal_mut_like. 1 hit. SSF49303. Glyco_hydro_2Ig. 2 hits. SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS00719. GLYCOSYL_HYDROL_F2_1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F0RBZ1_CELLC

Accession

Primary (citable) accession number: F0RBZ1

Entry history

Integrated into UniProtKB/TrEMBL:	May 3, 2011
Last sequence update:	May 3, 2011
Last modified:	May 1, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)