F0R236 (F0R236_BACSH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Pseudouridine synthase EMBL ADY37502.1

Gene names

Ordered Locus Names:

Bacsa_2972 EMBL ADY37502.1

Organism

Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78) [Complete proteome] [HAMAP] EMBL ADY37502.1

Taxonomic identifier

667015 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Bacteroidetes › Bacteroidia › Bacteroidales › Bacteroidaceae › Bacteroides › Bacteroides salanitronis

Protein attributes

Sequence length	224 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	pseudouridine synthesis Inferred from electronic annotation. Source: InterPro
Molecular_function	RNA binding Inferred from electronic annotation. Source: InterPro pseudouridine synthase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F0R236 [UniParc]. Last modified May 3, 2011. Version 1. Checksum: 97FDFA89D96FCE26	FASTA	224	25,414
	10 20 30 40 50 60 MTIVYEDNHI IIVNKTASEI VQGDKTGDTP LSEMLKQYIK EAYAKPGNVF LGVTHRLDRP 70 80 90 100 110 120 VSGLVVFAKT SKALSRLNDM FRNGEVRKTY WAIVKQCPPA EEGELVHYLV RNEKQNKSYA 130 140 150 160 170 180 YDREVKDSKK AVLHYKLIDR SENYYLVEVD LKTGRHHQIR CQLAKAGCPI KGDLKYGFPR 190 200 210 220 SNPDGSICLH ARTVSFIHPV SKKLIEVTAP LPEGNLWKAF QTIG

References

[1]

"Complete genome sequence of Bacteroides salanitronis type strain (BL78)." Gronow S., Held B., Lucas S., Lapidus A., Del Rio T.G., Nolan M., Tice H., Deshpande S., Cheng J.F., Pitluck S., Liolios K., Pagani I., Ivanova N., Mavromatis K., Pati A., Tapia R., Han C., Goodwin L. , Chen A., Palaniappan K., Land M., Hauser L., Chang Y.J., Jeffries C.D., Brambilla E.M., Rohde M., Goker M., Detter J.C., Woyke T., Bristow J., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P., Eisen J.A. Stand. Genomic Sci. 4:191-199(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 18170 / JCM 13567 / BL78.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002530 Genomic DNA. Translation: ADY37502.1.
RefSeq	YP_004259975.1. NC_015164.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADY37502; ADY37502; Bacsa_2972.
GeneID	10260926.
KEGG	bsa:Bacsa_2972.
PATRIC	46882238. VBIBacSal140776_3103.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K06180.
Enzyme and pathway databases
BioCyc	BSAL667015:GHA0-3134-MONOMER.
Family and domain databases
InterPro	IPR020103. PsdUridine_synth_cat_dom. IPR006145. PsdUridine_synth_RsuA/RluD. [Graphical view]
Pfam	PF00849. PseudoU_synth_2. 1 hit. [Graphical view]
SUPFAM	SSF55120. PsdUridine_synth_cat_dom. 1 hit.
ProtoNet	Search...

Entry information

Entry name

F0R236_BACSH

Accession

Primary (citable) accession number: F0R236

Entry history

Integrated into UniProtKB/TrEMBL:	May 3, 2011
Last sequence update:	May 3, 2011
Last modified:	May 1, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)