F0R194 (F0R194_BACSH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alanine racemase EMBL ADY36322.1
EC=5.1.1.1 EMBL ADY36322.1
EC=6.3.2.10 EMBL ADY36322.1

Gene names

Ordered Locus Names:

Bacsa_1763 EMBL ADY36322.1

Organism

Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78) [Complete proteome] [HAMAP] EMBL ADY36322.1

Taxonomic identifier

667015 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Bacteroidetes › Bacteroidia › Bacteroidales › Bacteroidaceae › Bacteroides › Bacteroides salanitronis

Protein attributes

Sequence length	823 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. SAAS SAAS011079

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS011079
Molecular function	Isomerase SAAS SAAS011079 EMBL ADY36322.1 Ligase EMBL ADY36322.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	alanine metabolic process Inferred from electronic annotation. Source: InterPro biosynthetic process Inferred from electronic annotation. Source: InterPro cell division Inferred from electronic annotation. Source: InterPro regulation of cell shape Inferred from electronic annotation. Source: InterPro
Cellular_component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity Inferred from electronic annotation. Source: EC UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity Inferred from electronic annotation. Source: InterPro alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F0R194 [UniParc]. Last modified May 3, 2011. Version 1. Checksum: C68A424FB9320380	FASTA	823	92,254
	10 20 30 40 50 60 MSSSIEEIVS VVGATRIGER QASISWILTD SRSLCFPEET LFFALKAKRN DGHKYIPELY 70 80 90 100 110 120 ARGVYNFVVA EVPEEMKNCT DVNFLVVGNV LKALQRLAGK HREQYQVPVI GITGSNGKTV 130 140 150 160 170 180 VKEWLYQLLS PDKRIIRSPR SYNSQIGVPL SVWMMDEHTE LGIFEAGISE MGEMETLEPI 190 200 210 220 230 240 IRPTIGVLTN IGGAHQENFS SLQDKCMEKL LLFKECDVIV YNGDNELIRD CVSKSLFTAR 250 260 270 280 290 300 EIAWSMKDPE RPLFIEKIEK DAAGTTIKYR YLGFFKEFRI PYIDDASIEN SLHCLAVALY 310 320 330 340 350 360 LMVPTEVIAE RMAHLEPVAM RLEVKEGKNG CVLINDSYNS DFASLDIALD FMARRSEDKA 370 380 390 400 410 420 RRRTLILSDI LETGQPGKLL YRQVAELVHS RGVDRLIGVG EEISASSSRF DVKEKQFFLT 430 440 450 460 470 480 TEELMASGVL ETLRNDIVLI KGARAFHFDA VSDFLELKVH ETILEINLNA LVDNLNYYRN 490 500 510 520 530 540 KLKPETKLMC MVKASAYGAG PFEVAKTLEE HRVDYLAVAV ADEGADLRKA GITCPIVIMN 550 560 570 580 590 600 PEATAFKTMF AYRLEPNIYG FPILEEMIKA AEREGVSNFP IHIKIDTGMH RLGFSPHQDM 610 620 630 640 650 660 QRLVERLHRQ SAVIPRSVFS HLAGSDSERF DAFTRKQIET FEAAAAELQA GFGVKILRHV 670 680 690 700 710 720 CNTAGIERYP GAQFDMVRLG IGLYGIDPFT NHILHNVSTL KTTILQIHDI PADETVGYSR 730 740 750 760 770 780 KGVLYRDSRI ATIPIGYADG LNRHLGNGHA YCLVNGKKAP YVGNICMDVC MIDVTDIDCK 790 800 810 820 EGDKAIIFGD DLPVTVLAEA LGTIPYEILT SVSNRVKRVY FQG

References

[1]

"Complete genome sequence of Bacteroides salanitronis type strain (BL78)." Gronow S., Held B., Lucas S., Lapidus A., Del Rio T.G., Nolan M., Tice H., Deshpande S., Cheng J.F., Pitluck S., Liolios K., Pagani I., Ivanova N., Mavromatis K., Pati A., Tapia R., Han C., Goodwin L. , Chen A., Palaniappan K., Land M., Hauser L., Chang Y.J., Jeffries C.D., Brambilla E.M., Rohde M., Goker M., Detter J.C., Woyke T., Bristow J., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P., Eisen J.A. Stand. Genomic Sci. 4:191-199(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 18170 / JCM 13567 / BL78.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002530 Genomic DNA. Translation: ADY36322.1.
RefSeq	YP_004258795.1. NC_015164.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADY36322; ADY36322; Bacsa_1763.
GeneID	10259667.
KEGG	bsa:Bacsa_1763.
PATRIC	46879604. VBIBacSal140776_1846.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01775.
Enzyme and pathway databases
BioCyc	BSAL667015:GHA0-1875-MONOMER.
Family and domain databases
Gene3D	2.40.37.10. 1 hit. 3.40.1190.10. 1 hit. 3.90.190.20. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR004101. Mur_ligase_C. IPR013221. Mur_ligase_cen. IPR000713. Mur_ligase_N. IPR005863. UDP-N-AcMur-pentapeptide_synth. [Graphical view]
PANTHER	PTHR23135:SF3. PTHR23135:SF3. 1 hit.
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. PF01225. Mur_ligase. 1 hit. PF08245. Mur_ligase_M. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF53244. Mur_ligase_C. 1 hit. SSF53623. Mur_ligase_cen. 1 hit. SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit. TIGR01143. murF. 1 hit.
ProtoNet	Search...

Entry information

Entry name

F0R194_BACSH

Accession

Primary (citable) accession number: F0R194

Entry history

Integrated into UniProtKB/TrEMBL:	May 3, 2011
Last sequence update:	May 3, 2011
Last modified:	May 1, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)