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F0Q4F6 (F0Q4F6_ACIAP) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length396 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding81 – 855GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding136 – 1394GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
F0Q4F6 [UniParc].

Last modified May 3, 2011. Version 1.
Checksum: 5C34207F34B14637

FASTA39643,128
        10         20         30         40         50         60 
MAKGKFERTK PHVNVGTIGH VDHGKTTLTA AIATVLSAKF GGEAKKYDEI DAAPEEKARG 

        70         80         90        100        110        120 
ITINTAHVEY ETANRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI 

       130        140        150        160        170        180 
LLARQVGVPY IIVFLNKCDM VDDEELLELV EMEVRELLDK YDFPGDDTPI VRGSAKLALE 

       190        200        210        220        230        240 
GDKGPLGEQA IDKLAEALDT YIPTPERAVD GAFLMPVEDV FSISGRGTVV TGRVERGIIK 

       250        260        270        280        290        300 
VGEEIEIVGI RDTQKTTCTG VEMFRKLLDQ GQAGDNVGLL LRGTKREDVE RGQVLCKPGS 

       310        320        330        340        350        360 
IKPHTHFTAE VYVLSKDEGG RHTPFFNNYR PQFYFRTTDV TGAIELPADK EMVMPGDNVS 

       370        380        390 
ITVKLINPIA MEEGLRFAIR EGGRTVGAGV VAKIIA 

« Hide

References

« Hide 'large scale' references
[1]"Complete sequence of Acidovorax avenae subsp. avenae ATCC 19860."
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Chertkov O., Held B., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Gordon S., Woyke T.
Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011.
[2]"Complete sequence of Acidovorax avenae subsp. avenae ATCC 19860."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Chertkov O., Held B., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Gordon S., Woyke T.
Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ATCC 19860 EMBL ADX44327.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002521 Genomic DNA. Translation: ADX44327.1.
CP002521 Genomic DNA. Translation: ADX48338.1.
RefSeqYP_004232894.1. NC_015138.1.
YP_004236905.1. NC_015138.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADX44327; ADX44327; Acav_0404.
ADX48338; ADX48338; Acav_4455.
GeneID10305305.
10309412.
KEGGaaa:Acav_0404.
aaa:Acav_4455.
PATRIC46835382. VBIAciAve68977_0410.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK02358.
OMAETARTTC.

Enzyme and pathway databases

BioCycAAVE643561:GHRD-404-MONOMER.
AAVE643561:GHRD-4511-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF0Q4F6_ACIAP
AccessionPrimary (citable) accession number: F0Q4F6
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: July 9, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)