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F0Q3J1

- F0Q3J1_ACIAP

UniProt

F0Q3J1 - F0Q3J1_ACIAP

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Protein
Alanine racemase
Gene
Acav_0310
Organism
Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011)
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity.UniRule annotation

Catalytic activityi

L-alanine = D-alanine.UniRule annotationSAAS annotations

Cofactori

Pyridoxal phosphate By similarity.UniRule annotationSAAS annotations

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei35 – 351Proton acceptor; specific for D-alanine By similarityUniRule annotation
Binding sitei130 – 1301Substrate By similarityUniRule annotation
Active sitei257 – 2571Proton acceptor; specific for L-alanine By similarityUniRule annotation
Binding sitei305 – 3051Substrate; via amide nitrogen By similarityUniRule annotation

GO - Molecular functioni

  1. alanine racemase activity Source: UniProtKB-HAMAP
  2. pyridoxal phosphate binding Source: UniProtKB-HAMAP
Complete GO annotation...

GO - Biological processi

  1. D-alanine biosynthetic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotationsImported

Keywords - Ligandi

Pyridoxal phosphateUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciAAVE643561:GHRD-310-MONOMER.
UniPathwayiUPA00042; UER00497.

Names & Taxonomyi

Protein namesi
Recommended name:
Alanine racemaseUniRule annotation (EC:5.1.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:Acav_0310Imported
OrganismiAcidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011)Imported
Taxonomic identifieri643561 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeAcidovorax
ProteomesiUP000002482: Chromosome

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei35 – 351N6-(pyridoxal phosphate)lysine By similarityUniRule annotation

Structurei

3D structure databases

ProteinModelPortaliF0Q3J1.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

KOiK01775.
OMAiSRLGLWH.

Family and domain databases

Gene3Di2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPiMF_01201. Ala_racemase.
InterProiIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamiPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSiPR00992. ALARACEMASE.
SMARTiSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMiSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsiTIGR00492. alr. 1 hit.
PROSITEiPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F0Q3J1-1 [UniParc]FASTAAdd to Basket

« Hide

MPRPIRATIH TAALQQNLAR ARAATPDARV WAVVKANAYG HGIERAFEGL    50
RGADGFALLD LGEAERVRQL GWRGPILLLE GVFEPRDLEL CSRLSLWHVV 100
HCDEQIDWLS AHKTHAPHRV FLKMNSGMNR LGFPPARYRA AWARLNALPQ 150
VDEISFMTHF SDADGPRGIA HQIEAFCTAT QDLPGERTVS NSAATLRHAG 200
GDARVRGDWV RAGIVLYGSA ADHPEHTAAH WGLAPTMTLS ARIIGTQQLQ 250
AGDTVGYGSS FTADRPLAIG VVACGYADGY PRHAPTGTPV LVNGVRTRTV 300
GRVSMDMITV DLSPLHEAGV EAGVGSEATL WGRASCGAVL CIDDVAQPAG 350
TVGYELMCAL APRVPVVVD 369
Length:369
Mass (Da):39,576
Last modified:May 3, 2011 - v1
Checksum:iB6C3BE8A38403396
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002521 Genomic DNA. Translation: ADX44233.1.
RefSeqiYP_004232800.1. NC_015138.1.

Genome annotation databases

EnsemblBacteriaiADX44233; ADX44233; Acav_0310.
GeneIDi10305211.
KEGGiaaa:Acav_0310.
PATRICi46835193. VBIAciAve68977_0316.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002521 Genomic DNA. Translation: ADX44233.1 .
RefSeqi YP_004232800.1. NC_015138.1.

3D structure databases

ProteinModelPortali F0Q3J1.
ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADX44233 ; ADX44233 ; Acav_0310 .
GeneIDi 10305211.
KEGGi aaa:Acav_0310.
PATRICi 46835193. VBIAciAve68977_0316.

Phylogenomic databases

KOi K01775.
OMAi SRLGLWH.

Enzyme and pathway databases

UniPathwayi UPA00042 ; UER00497 .
BioCyci AAVE643561:GHRD-310-MONOMER.

Family and domain databases

Gene3Di 2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPi MF_01201. Ala_racemase.
InterProi IPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view ]
Pfami PF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view ]
PRINTSi PR00992. ALARACEMASE.
SMARTi SM01005. Ala_racemase_C. 1 hit.
[Graphical view ]
SUPFAMi SSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsi TIGR00492. alr. 1 hit.
PROSITEi PS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Acidovorax avenae subsp. avenae ATCC 19860."
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Chertkov O., Held B., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Gordon S., Woyke T.
    Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011.

Entry informationi

Entry nameiF0Q3J1_ACIAP
AccessioniPrimary (citable) accession number: F0Q3J1
Entry historyi
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: July 9, 2014
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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