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F0Q3J1 (F0Q3J1_ACIAP) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length369 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622

Sequence similarities

Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
   LigandPyridoxal phosphate RuleBase RU000608 SAAS SAAS020622
   Molecular functionIsomerase RuleBase RU000608 SAAS SAAS020622 EMBL ADX44233.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processD-alanine biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-UniPathway

   Molecular_functionalanine racemase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F0Q3J1 [UniParc].

Last modified May 3, 2011. Version 1.
Checksum: B6C3BE8A38403396

FASTA36939,576
        10         20         30         40         50         60 
MPRPIRATIH TAALQQNLAR ARAATPDARV WAVVKANAYG HGIERAFEGL RGADGFALLD 

        70         80         90        100        110        120 
LGEAERVRQL GWRGPILLLE GVFEPRDLEL CSRLSLWHVV HCDEQIDWLS AHKTHAPHRV 

       130        140        150        160        170        180 
FLKMNSGMNR LGFPPARYRA AWARLNALPQ VDEISFMTHF SDADGPRGIA HQIEAFCTAT 

       190        200        210        220        230        240 
QDLPGERTVS NSAATLRHAG GDARVRGDWV RAGIVLYGSA ADHPEHTAAH WGLAPTMTLS 

       250        260        270        280        290        300 
ARIIGTQQLQ AGDTVGYGSS FTADRPLAIG VVACGYADGY PRHAPTGTPV LVNGVRTRTV 

       310        320        330        340        350        360 
GRVSMDMITV DLSPLHEAGV EAGVGSEATL WGRASCGAVL CIDDVAQPAG TVGYELMCAL 


APRVPVVVD

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References

[1]"Complete sequence of Acidovorax avenae subsp. avenae ATCC 19860."
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Chertkov O., Held B., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Gordon S., Woyke T.
Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002521 Genomic DNA. Translation: ADX44233.1.
RefSeqYP_004232800.1. NC_015138.1.

3D structure databases

ProteinModelPortalF0Q3J1.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADX44233; ADX44233; Acav_0310.
GeneID10305211.
KEGGaaa:Acav_0310.
PATRIC46835193. VBIAciAve68977_0316.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01775.
OMAIRATIHT.

Enzyme and pathway databases

BioCycAAVE643561:GHRD-310-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF0Q3J1_ACIAP
AccessionPrimary (citable) accession number: F0Q3J1
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: May 1, 2013
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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