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Protein
Submitted name:

Superoxide dismutase copper/zinc binding protein

Gene

Acav_2604

Organism
Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. metal ion binding Source: InterPro

GO - Biological processi

  1. oxidation-reduction process Source: InterPro
  2. superoxide metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciAAVE643561:GHRD-2641-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Superoxide dismutase copper/zinc binding proteinImported
Gene namesi
Ordered Locus Names:Acav_2604Imported
OrganismiAcidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011)Imported
Taxonomic identifieri643561 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeAcidovorax
ProteomesiUP000002482 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3737 PotentialImportedAdd
BLAST
Chaini38 – 238201 PotentialImportedPRO_5000715466Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliF0Q1J1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

KOiK04565.
OMAiCGAQGTK.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

F0Q1J1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MILHLSRPTH STPRPLRLAT ALAAAGATLA LAGCGAQGTK TQGTPAPHAV
60 70 80 90 100
EAASSATKMP VPGPERATAS ARLMTADGQP AGTAVLTETP SGVEIAAQVQ
110 120 130 140 150
GLSAGLHGFH IHANGQCAPG PDAATGKTIP FGAAGGHFDP GMSHQHGQPG
160 170 180 190 200
APIDKAHAGE LPNITVGADG RGTLRYLNAN VTLTPGKASI MGRALVVHEK
210 220 230
EDDYKSNPAG NSGGRVLCGV IEPAQPSSVV GQAPAPRN
Length:238
Mass (Da):23,711
Last modified:May 3, 2011 - v1
Checksum:i03189D81DEB0C043
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002521 Genomic DNA. Translation: ADX46516.1.
RefSeqiYP_004235083.1. NC_015138.1.

Genome annotation databases

EnsemblBacteriaiADX46516; ADX46516; Acav_2604.
KEGGiaaa:Acav_2604.
PATRICi46840022. VBIAciAve68977_2658.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002521 Genomic DNA. Translation: ADX46516.1.
RefSeqiYP_004235083.1. NC_015138.1.

3D structure databases

ProteinModelPortaliF0Q1J1.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADX46516; ADX46516; Acav_2604.
KEGGiaaa:Acav_2604.
PATRICi46840022. VBIAciAve68977_2658.

Phylogenomic databases

KOiK04565.
OMAiCGAQGTK.

Enzyme and pathway databases

BioCyciAAVE643561:GHRD-2641-MONOMER.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Acidovorax avenae subsp. avenae ATCC 19860."
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Chertkov O., Held B., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Gordon S., Woyke T.
    Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011Imported.

Entry informationi

Entry nameiF0Q1J1_ACIAP
AccessioniPrimary (citable) accession number: F0Q1J1
Entry historyi
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: April 1, 2015
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.